Chryseobacterium nepalense: M0D58_17450
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Entry
M0D58_17450 CDS
T08142
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cnp
Chryseobacterium nepalense
Brite
KEGG Orthology (KO) [BR:
cnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnp03016
]
M0D58_17450 (truB)
Enzymes [BR:
cnp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M0D58_17450 (truB)
Transfer RNA biogenesis [BR:
cnp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M0D58_17450 (truB)
Prokaryotic type
M0D58_17450 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
YyzF
Motif
Other DBs
NCBI-ProteinID:
UPQ75819
LinkDB
All DBs
Position
3858217..3858915
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AA seq
232 aa
AA seq
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MTAEDLQSGHLFLLDKPLDWTSFQAVNKMKYKLKREFNLPKKFKIGHAGTLDPRATGLLI
VCCGKFTKKIPEIQDAPKEYWTEIKIGVQTESYDTEKPEILHQDISHITEEHIHSALEKF
VGEIDQIPPVFSAIKIEGKRAYDLARAGEEVEMKSRKTTIFYINEIKIDLPLVSFNVGCS
KGTYIRSLAHDIGQELGVGAYLTQLRRTKIGDYKIEDATSNFLENDFRFNLS
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaagacttacagtcaggacatctatttttattggacaagcctttggattgg
acctcttttcaggcggtcaataaaatgaaatataaactcaaaagagaatttaacctccca
aaaaaatttaagatcggccacgcaggaacattagatccgagagcgaccggacttctgatt
gtatgttgtggaaaattcacgaaaaaaattccggaaatccaggatgcgcctaaagagtat
tggacagagataaaaattggtgttcagaccgaatcctacgataccgaaaagccggaaatt
cttcaccaggatatttcgcatattacggaagaacatattcatagcgcattagaaaaattt
gtgggagaaatagaccagattccgccggttttttccgctataaaaattgaagggaaaaga
gcatatgacctggccagagcaggtgaggaagttgaaatgaaatcccggaaaacaactatt
ttttatatcaatgaaattaaaattgaccttccgctggtgagttttaacgtaggctgttca
aaaggtacttacatcagaagccttgcacatgacatcgggcaggagcttggagttggagca
tatcttacacagttgagaagaaccaaaatcggggattacaagattgaggatgcaacttct
aattttctggaaaatgattttagatttaatctgtcatga
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