Catalinimonas niigatensis: PZB72_03560
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Entry
PZB72_03560 CDS
T10977
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K02014
iron complex outermembrane recepter protein
Organism
cnq Catalinimonas niigatensis
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnq02000
]
PZB72_03560
Transporters [BR:
cnq02000
]
Other transporters
Pores ion channels [TC:
1
]
PZB72_03560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
STN
CooC_C
MetallophosN
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
WPP51464
LinkDB
All DBs
Position
complement(910732..914529)
Genome browser
AA seq
1265 aa
AA seq
DB search
MKKQLSTQFKLLMLGWLGVLLTVVSPLSAQQLQASVLPQQMAQRISLQLNNIGVSELLEA
IEEQSEYVFIYSHSNIDSSIRISVEAVDEPVEEVLSKALRPHEIGYTIVGNQVILKHKEM
VRKIPQQKTRLSHLLAVPSDDVLTTSSALHASVKEMEKIITGQVTDENNVPLPGVNILVK
GTAIGTVTDVEGNYRLSAPDDATALVFSFIGYATEEVEIGNQNVINVSIMPDIQALSEVV
VTALGMEQEKRKLGYTVTELKGGELAQTNEVNPINALQGKVAGVQIDQGGGGLFGTSKIL
IRGNSTLSNNNQPIFVIDGVFMENDVFSGTGRDFGNNLKNLNMEDFESVSVLKGSAAAAL
YGSRAINGVILITTKKGRKNSGIGLSVTQNINVFQPFSGPEFQDVFGGGSVGAFFTDRRD
PNYQPDEAWRTKVFPVDPISGQPYIDPQINRELENWGPRMEGQEVLNYDGTPTRFLPQPD
NFMDAFRNGFGSNTNVALDGGTDRSTFRLSYSHNSSQGVVYNNNMTKNGFNLRATHELTS
FLQADASMDYTTFEGKNPPRLGGLDAFASYNFGKLYSWILPRNYDTEYWMKRENYTSSLG
GAPNPADPDETNKAPESRFWFSLFENNYLQNEESLRGRLALTATLTDWAKVIVEGNFYNN
YVKQENQELGQGRDFTGGMYGLGHSTRKSNFMKAIVMVNKAFDETWEFSGYIGAESQQFS
RTFNYSETRGGLLYPGNFFLANSVDPQFTQGGISERKTINSLYSSVDVSFKDQLFLLATW
RGDWSSALTYVDGSGNNFFNYPAVSLSWVLSETLATPSWVTFAKLRGNIAALGRDTNPFI
LNPGFTFNGFTNIRGNDLPLSTFSNRQVLESNIKPERKIAKEVGLEARLFDNRIGFDLSL
YQDNTKNQIIDISAPNESGVESILINAGNIQNRGIELSIDGTPLRIGDFQWNTMLNFSRN
RNLIVDLYEGREEYNLDANIGEISTWAVVGKSYGTLRSSIESKIFQAEDAEGNPVANPNN
GLPELSWRADARAAFPARSNELRDVGDINANFRAGWNNTFNYKNFSLGVLLDAKVGGDFV
LLSYRYGTHTGVLPNTLEGRDAEYGGITWTSAYDGETYDDGIIPEGVFAQGQTVTQPDGT
QAEVGGLTYQQAYDAGLVEPTHAPQFFYRYGSSSTGVSDYWVFENSWVSMREISLSYRLP
QAALERLNLKGLSISLIGRDLFYLYNSLPYNFNPASNNSNNTAFSGEQGFLPMTRTLGAT
LRFQL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaattatctactcaatttaagctgctgatgcttggctggttaggggtacta
ctcacggtagtaagcccactttctgcccagcaactgcaagctagtgtattgccacagcaa
atggcgcaaaggatcagcttacaactaaacaatataggtgtaagcgaattacttgaagcc
attgaagaacaatccgaatacgttttcatttatagccacagtaacattgatagcagtatc
aggatatcggtagaggcggtagatgagccggtagaagaagtattgagcaaagccttacgt
cctcatgaaattggctataccatcgtaggcaatcaggttattctgaagcataaagagatg
gtccgtaaaattccacagcaaaaaaccaggctaagccatctccttgctgtgccttctgat
gatgtgctgactacttcatctgcgctgcatgcttccgtaaaagagatggaaaaaatcatc
accggtcaggtgactgatgaaaataacgtacctttgcccggagtaaacattttggtgaaa
ggtaccgctataggaaccgtaaccgatgtggagggtaattacaggctgagtgccccggat
gatgcaaccgcgttggtattttcttttattggctatgctaccgaagaggtggaaataggc
aaccaaaatgttattaatgtaagtattatgcctgatatccaggcactttctgaagtagta
gttactgctttaggcatggaacaggaaaagagaaagctgggctatactgttactgaactg
aaagggggagaactggctcaaaccaatgaagtcaacccaattaacgcgctacagggaaaa
gtagcgggagtacagattgatcagggcggcggtggactcttcggtacctccaaaatcctg
attcgcggtaactctaccctgagcaacaataaccagccgatctttgtcatagatggcgta
ttcatggaaaatgatgtgttcagcggtacaggccgggattttggcaacaatctgaaaaac
cttaacatggaagattttgaaagtgtctctgtgctcaagggatcagcagcagcagcgctt
tacggatcaagggctatcaatggagtgatcctgatcacaaccaaaaaaggcagaaaaaat
tctggcatcggtttgtccgtaacgcagaatatcaatgtgtttcaacctttctcaggtccg
gaatttcaggatgtatttggcggtggatcagtaggggctttctttactgaccgcagagat
cctaactatcagccggatgaagcctggcgtaccaaagtatttccggtagatccgatcagc
ggacagccgtacattgatccgcagatcaatcgagaactggaaaactggggaccccggatg
gaaggacaggaagtgctcaactatgatggaacacctacccgattcctccctcagcccgac
aactttatggatgctttccgcaatggctttggttcaaataccaacgtagcgctggatgga
ggtaccgatcggtctaccttccgtttgtcctattctcacaacagcagccagggcgttgtg
tataataacaacatgaccaaaaatggctttaaccttagggctacccacgaactgaccagc
ttcctgcaggcagatgccagtatggactatactacttttgagggaaaaaatcctcctcgt
ctgggtgggctggacgcctttgcttcttacaactttggtaagctgtatagctggattttg
ccccgtaattatgataccgaatactggatgaaacgggaaaactataccagtagcctgggt
ggagcacccaatcctgctgatcctgatgaaaccaacaaagcacccgaatctcgcttctgg
ttctctctctttgaaaacaattatctgcaaaacgaagagtctctgagaggccgtctggca
cttactgctaccctgaccgactgggcgaaagtgatcgtagaaggaaatttctataataac
tatgtgaagcaggagaaccaggaattgggacagggaagagattttaccggtggtatgtat
ggcttaggccactctacccgtaaaagtaactttatgaaagccatcgtgatggtgaataaa
gcttttgatgaaacatgggaatttagtggatatataggcgcagaaagtcagcagtttagc
cgtacgtttaattacagtgaaaccagaggtggattgctgtatcccggtaattttttcctg
gccaactctgtagatccgcagtttacgcaaggaggaatcagcgagagaaaaaccatcaat
tcactctattccagtgtagatgtttctttcaaggatcagttatttctactggctacctgg
agaggggactggtcgtcggcattgacttatgtggatggttcaggaaacaatttcttcaac
tatccggcggtgagtttgtcctgggtgttgagcgaaacacttgctacgccttcctgggtt
acctttgccaagctgagaggaaacatagcagcgctgggaagagacaccaacccatttata
cttaatcctggctttaccttcaacggctttaccaatattcggggcaacgacctgccactg
tctaccttcagcaaccgccaggtgctggaaagcaatatcaagccggaaaggaagatagcc
aaagaagtgggattggaagctcgcctgtttgacaaccgcatcggatttgacctgagcttg
tatcaggacaataccaaaaaccagatcatagacatctccgcacccaatgaatctggtgta
gaaagcatcttaatcaatgccggtaatatccagaacagaggaatagagctgtccatagat
ggtacacccctgagaattggtgattttcagtggaataccatgctgaactttagcagaaac
cgaaacttgattgtagacctttatgaaggcagggaagaatataatctggatgcgaatatc
ggagaaatcagtacctgggcggtagtaggcaaatcttatggcactttacgctcctccata
gagtccaaaatttttcaggctgaagatgcggaaggtaatccggtagccaatcctaataat
ggactgcctgagctaagctggcgtgctgacgcacgcgcggcttttcccgcgcgtagcaac
gagctcagagatgtgggtgatatcaatgcgaacttccgtgccggctggaacaatactttc
aactacaaaaacttttccctgggcgtgctgttggatgccaaggtaggaggggattttgtt
ctactttcttaccgctatggcacccacactggagtgctgcccaatactctggaaggacgt
gatgcagaatacggaggcatcacctggaccagtgcatatgatggagaaacctatgatgat
ggtatcattcctgaaggcgtatttgcccagggacagacggtgacccaacccgacggtact
caggctgaagtaggaggcctgacctatcagcaagcctatgatgcggggctggtagaacct
acccacgcaccacagtttttttaccgctacggttcatcctctactggtgtgtcagactac
tgggtttttgaaaatagctgggtgtccatgcgggagatatcgcttagttaccgtctgcca
caggctgctttggaaagactgaacctcaaaggcttaagcatcagccttatcggcagggat
ttgttttatctgtataattcacttccctataactttaatccggcttctaacaactccaac
aatactgccttttcgggagagcaaggcttcctgccgatgacacgtaccttaggagctact
ttaagattccagttgtga
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