Catalinimonas niigatensis: PZB72_05950
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Entry
PZB72_05950 CDS
T10977
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
cnq Catalinimonas niigatensis
Pathway
cnq02024
Quorum sensing
cnq03060
Protein export
cnq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PZB72_05950 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PZB72_05950 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PZB72_05950 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cnq02044
]
PZB72_05950 (secDF)
Secretion system [BR:
cnq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PZB72_05950 (secDF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
PARM
Motif
Other DBs
NCBI-ProteinID:
WPP51928
LinkDB
All DBs
Position
complement(1540227..1543109)
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AA seq
960 aa
AA seq
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MRNKNVVVILTIIVSLICLYSLSFTFISRNVQQRATAYATTSEGEVDQAKKQQYLDSIWE
KPVYKLVGYPYTFQDVKEKELNLGLDLQGGMHIIMEISPIEVLKALSNNEQSQAFQQALK
EAEKLQKIDNESFVDLFYKQYQKLAPESPLHTIFANSRNQEYIDGESSDADVLAFIQQEV
NDAVDRSFEIVRNRIDKFGVTQPNVQRLPGTERIQLELPGVDNPERVRKLLQGIAQLEFR
QVIELEEMLPYWEQASHYWTTQHTEQKPFPLISADSIDLEQQLLQDTTSSALDFPIFGLS
ASTYRLAYQIADTATISTTLKELKAARVLPNDVAFLWDVKPENESEILELYVVRSGRSIS
GMLGGDVITNATQNLENGKPSVAMQMNTEGSRKWKKMTSENIGHRIAIVLDDQVYSAPVV
QTEIPNGNSSISGNFTIEEAQDLANILKAGKMPAPIQIIEEAVVGPTLGIETITQGLVSM
AAGLGLVVMFMVLYYSSGGMVANIALLFNIFFIIGVLAQLSASLTLPGIAGIVLTIGMSV
DANVLIFERVKEELGNGKSVLNAIKLGYDKAYSSIIDSNATTFLTGVILYTFGSGGIKGF
AVVLMIGIVSSLFTAVFISRLMIESLAKRGKVLSFTTLFSKSLFKDVSFNFIQKRKWAYR
LSVLTVIVGLACITLQGGLNLGVDFKGGRSYVVRFDTPVAASDVRIVMLSDFQGAGLEVK
TFNQDNQLKITTSYLAEDHSEKADLQVKEALEKGLQNYNIEHPEIISSAKIGATMAQDVK
EAAQSSVIYTLGIIFLYILVRFQKWQYGLGAVVALAHDVLMVFAAYAIARAFGFVLEIDQ
VFIAAILTIIGYSINDTVVVFDRIREFTQQKTDGLELMYNKAINDTLSRTIITSFTVFVV
VVVLLVFGGEVLRGFSFALLVGVILGTYSSIFIAAPLALDVTGWRNRKIDKVGNRQLSKA
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacaaaaatgtagttgtcattttgacgatcatagtgtcgttgatatgtttatat
tctttatcttttacctttatttcccgcaacgttcagcaacgggccactgcttatgccact
acttcagaaggagaagtggatcaggcaaaaaaacaacagtacctggattccatctgggaa
aagccagtgtacaaacttgtgggatatccttatacctttcaggatgttaaggaaaaagaa
ctcaaccttggattggaccttcaggggggtatgcacatcatcatggaaatatctccaata
gaagtgctaaaagctttgtccaacaatgagcaaagccaggcttttcagcaagcgcttaag
gaggctgaaaaattacagaaaatagacaacgagtcctttgtggatcttttttataagcag
tatcagaagcttgctcccgagtcgcctttgcataccatttttgccaacagcagaaaccag
gagtatattgatggtgagtcttcggatgctgatgttctggcctttatccagcaggaggtc
aatgatgctgtagaccgttcctttgaaatagtcagaaaccgcattgataagtttggagta
acccaacccaacgttcagcgtctacccggtacagaaagaattcaactggaattgccaggc
gtggataatcctgaacgagtgcgtaagcttttgcagggtattgcccaactggaatttcgt
caggtgatagaattggaagaaatgctgccttactgggagcaggcgagccattactggacc
acacagcatactgagcagaaaccgtttcccttaatttcggctgattcaatagacctggaa
cagcaactgctacaggatactactagctcggcgcttgattttccgatctttggactgtcc
gcatcaacttaccggcttgcctatcaaatcgcagatactgctacaattagcacaactctt
aaggaactaaaagccgcccgtgttttgccgaatgatgtagcttttctctgggatgtaaag
cctgaaaatgaatcagaaatactggagttgtatgtggtcagaagcggaaggagtatttca
ggtatgttgggaggcgatgtaattaccaatgctacccaaaaccttgaaaatggaaaacct
tcggtggctatgcagatgaatacggaaggtagcaggaaatggaaaaagatgacatcagaa
aacataggccatcgtattgcgattgttctagatgaccaggtctattccgctcctgtggtg
cagactgaaatacccaatggaaactcttccatttccggaaattttaccatagaggaagcc
caggatttggctaatatactcaaagccgggaagatgcctgcacccatacaaatcatagaa
gaagctgtagttggacctactttaggcatagaaacgattacgcaagggctggtgtcaatg
gcagcaggcttagggctggtggtgatgtttatggttttgtattacagtagcggaggtatg
gttgccaatatagcgctgctatttaatatattctttatcatcggggtattggcccagcta
agtgcttcacttaccttgcctggtatcgcaggtattgtgcttaccattggtatgtcagta
gatgccaacgtactgatctttgagcgagtcaaggaagagcttgggaatggtaaatcagtc
ctcaatgcaatcaaactagggtatgataaagcttacagttcaatcatagactctaatgct
acaacttttctgacaggggtgattctctatactttcggctcaggaggtatcaagggcttt
gcagtggtattgatgatcggtattgtttcttctttgttcaccgctgttttcattagcagg
ctgatgatagaaagtttggcaaaaagaggtaaagtattgagttttactactttattttcc
aaatctttattcaaagatgtttccttcaattttatacaaaaaaggaagtgggcataccgt
ttatctgttttgactgtcattgtaggcttggcatgcatcacgctacagggagggttaaat
ctgggtgtggattttaaaggcggaagaagttatgtagtacgctttgatacgcctgtggct
gcctctgatgtgcgtatcgtcatgctttcggactttcagggagcgggtcttgaggtaaaa
acctttaatcaggataaccagttgaagatcaccacaagttaccttgccgaggatcattca
gaaaaggctgacctgcaggtaaaagaagcgttggaaaaagggctgcaaaactacaacata
gaacatcctgaaatcattagctcagcaaaaataggggctacgatggcccaggatgtaaaa
gaggccgcgcaatcctctgttatttatactttagggattatctttctgtatatccttgtc
cgctttcaaaaatggcaatatggacttggggcagtagttgccctggctcatgatgtgctg
atggtttttgcggcttatgccattgcccgagcctttggttttgtattggaaattgaccag
gtttttattgcagccattcttactattatcggttattctattaacgatacggtggtggtg
tttgaccgcatacgtgaatttacccagcagaaaacggatggtctggagctaatgtataac
aaagccatcaatgatacgctcagccgtaccatcatcacttcctttaccgtatttgtggtg
gttgtagtactcctggtctttggaggtgaagtcctgagaggattttcctttgctttgctg
gtcggtgtaatattaggaacctattcatccattttcattgctgcacctctggctttggat
gtaacaggttggagaaatcgcaaaattgataaggtaggcaacaggcaattaagcaaggca
tga
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