Catalinimonas niigatensis: PZB72_06630
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Entry
PZB72_06630 CDS
T10977
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cnq Catalinimonas niigatensis
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnq03032
]
PZB72_06630
03400 DNA repair and recombination proteins [BR:
cnq03400
]
PZB72_06630
Enzymes [BR:
cnq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PZB72_06630
DNA replication proteins [BR:
cnq03032
]
Prokaryotic type
DNA Topoisomerases
PZB72_06630
DNA repair and recombination proteins [BR:
cnq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PZB72_06630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
RFC1
Motif
Other DBs
NCBI-ProteinID:
WPP52053
LinkDB
All DBs
Position
1701086..1702084
Genome browser
AA seq
332 aa
AA seq
DB search
MYISQEAEGFTRVRRGKGFSYHKTSGEIIKDSSTLERIKSLGIPPMWKNVWISKSPKSHL
QATGYDQKNRKQYVYHAVWTDYRNLAKFTRIKEFGYAIPYIREHTSKQLNQKAWTKEKVI
SLVIQMMDEYHIRIGNQYYKEQNETFGLTTLRKKHLDFEKGVGKLEYKAKSGKYRKINLQ
NGHLSKLIKECAELPGYEIFTYKDENKKNHTINSHDVNEYLHKIAGENFTSKDFRTWGGT
TLAVEKQEEARHALEENPRLKLESAIVKIVAQELGNTVSVCKEYYIHPMILEKVIQEQDL
KPYASRSSLPLPSNKVRLLRNSEIIVLNILNT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgtacatttcgcaggaagcggaaggatttacacgtgtacgaagaggaaaaggctttagc
tatcataagacatcaggagaaattatcaaagattcttctactttggagagaataaaatct
ttgggaattcctcctatgtggaaaaatgtctggatcagtaaaagccccaaaagtcattta
caggcgacaggttatgaccagaaaaaccgtaagcagtatgtttatcatgctgtctggaca
gactataggaatcttgctaaatttacccgaatcaaggaatttggctatgcaattccctat
ataagggagcatacatccaaacaacttaatcagaaggcttggaccaaggaaaaagtaatt
tctctggtgatacaaatgatggatgaatatcatattcgtatcggcaaccaatattataaa
gaacagaatgaaacttttggattgactactttaagaaaaaaacatctggactttgaaaaa
ggtgttggtaagctagagtataaagcaaaaagtggcaaataccgtaaaatcaatttacaa
aatggacatcttagtaagttaattaaggaatgtgccgaacttccggggtatgaaatattt
acctataaggatgagaataagaaaaaccatactattaattctcatgatgttaatgaatat
ttacacaaaattgctggtgagaattttaccagcaaagatttcagaacctggggaggtact
acactggcagtggaaaaacaagaagaggctcgtcatgctcttgaggaaaacccacgcctc
aaacttgaatctgccatagtcaaaatagtagcacaggagttaggcaataccgtaagcgtt
tgtaaagaatattatatccatcctatgatacttgagaaagtcattcaggaacaggatctt
aagccttatgcctccagaagttcattgccattgccttccaataaggtacgattacttaga
aatagcgaaattattgtgctcaatattcttaatacataa
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