Catalinimonas niigatensis: PZB72_06990
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Entry
PZB72_06990 CDS
T10977
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
cnq Catalinimonas niigatensis
Pathway
cnq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PZB72_06990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnq03021
]
PZB72_06990
Transcription machinery [BR:
cnq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PZB72_06990
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Scm3
Motif
Other DBs
NCBI-ProteinID:
WPP52123
LinkDB
All DBs
Position
complement(1793040..1793903)
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AA seq
287 aa
AA seq
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MRQLKISKQITNRESQSLDKYLQEIGKVDLLTPDEEVDLAKRIRSGDQLALEKLTKANLR
FVVSVAKQYQNQGLTLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSELEQKYEREPSPDELAEVLEVTTNEVVDTMKISGRHV
SMDAPFVQGEENSLLDVLENDNEDTPDSSLMNDSLRREVQRALSTLTQREADVITLYFGL
NGEHSMTLEEIGERFSLTRERVRQIKEKAIRRLRHTSRSKALKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactaaagattagtaaacagattactaatagggaaagtcagtcgcttgacaaa
tacctgcaggagatcggtaaagttgatttgcttacaccggatgaggaagtagatctggct
aagagaatacgatcaggcgaccaacttgctcttgaaaagcttaccaaagctaaccttagg
tttgttgtttcagtagctaagcagtatcaaaatcagggtttgaccttaggcgatttgatc
aatgaaggtaatctgggattaatcaaagcagcacaaagatttgacgaaacccgtggtttt
aagtttatctcttatgccgtgtggtggattcgtcagtctattcttcaggcattagcagaa
caatctaggattgtacgcttacctttaaaccgtgtaggctctcttaacaaaatctcaaag
actttctctgaacttgagcaaaaatatgaaagagaaccttctccagatgagttggctgag
gtattagaggttactaccaatgaggtagtagatactatgaagatttccggaaggcatgtt
tctatggatgctccctttgttcagggagaagagaacagcttactcgatgttttagaaaat
gacaatgaagatacaccggattcttcactgatgaatgactctctcagaagagaggtacag
agagcgttatctacgcttacgcaacgtgaagccgatgtgatcaccttgtactttgggctt
aatggagagcactcaatgacactcgaagagattggtgaaaggtttagcctgacacgtgag
cgagtaagacagatcaaagagaaagccatccgccggttgcgacatacttctcgtagcaag
gcgctcaagccgtatctgggctaa
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