Catalinimonas niigatensis: PZB72_11130
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Entry
PZB72_11130 CDS
T10977
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cnq Catalinimonas niigatensis
Pathway
cnq03030
DNA replication
cnq03430
Mismatch repair
cnq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PZB72_11130
03430 Mismatch repair
PZB72_11130
03440 Homologous recombination
PZB72_11130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnq03032
]
PZB72_11130
03400 DNA repair and recombination proteins [BR:
cnq03400
]
PZB72_11130
Enzymes [BR:
cnq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PZB72_11130
DNA replication proteins [BR:
cnq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PZB72_11130
DNA repair and recombination proteins [BR:
cnq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PZB72_11130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WPP52928
LinkDB
All DBs
Position
2732298..2733242
Genome browser
AA seq
314 aa
AA seq
DB search
MNFVALDFETANHQRESVCEIGIAIVQDGVVKEQKSWLVRPRNNWFNSMNTRIHGIDAQK
VAHSPEFDEIWQTVRSYFEDAYVVAHNASFDLSVLRHVLAQYELPFPHLSYACSLQVARR
AWRGFPSYGLSALSERFGISLNHHAAGSDAEACAHILLKAMEAHQLTQFEDIEQAFGIQL
GKLYAQGYIPSGRSSRPQKKKKLSLQNMPLDLSRVSKSHPLYGKSVVFTGSLRSMSRAEA
QKSVIEAGGNSTNFVNDQTHYLVLSERVFVNLARGGHNNKVQQAQHLNAGRKPVTLISEG
EFLTLLQYEVSEEP
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtggccctggattttgaaactgccaaccatcagagagaaagtgtctgtgaa
atcggtatcgctatcgtacaggatggcgtagtaaaagagcaaaaatcctggctggtgagg
cctcgcaacaactggttcaacagcatgaacaccagaattcatggcattgacgcccaaaaa
gtagcgcattcccccgagtttgatgagatatggcaaacagtaagaagctattttgaggat
gcctatgtggttgcccacaatgcgagttttgacctaagcgtattacgacatgtactggcc
cagtatgagcttccttttcctcatctcagctatgcctgtagcctgcaggtggccaggcgg
gcctggcggggctttccttcttacggactgagtgccctatccgaacgctttggtatttct
ttgaatcaccatgctgccggttcagatgccgaagcctgcgcccatatcctgctcaaagca
atggaagctcatcaactcacacaatttgaggatattgagcaagcctttggaatacagcta
ggcaaactttacgcccagggttacattccttcggggcgtagcagcaggccccaaaagaaa
aagaagctcagtctgcaaaatatgcctcttgacctgtccagggtcagcaagtctcaccct
ctctatggtaaatcggtggtttttaccggctcactcaggagcatgagccgggcagaggca
cagaagtctgtcattgaagcaggagggaattctaccaattttgtcaatgaccaaacacat
tatctggtccttagtgagagagtatttgttaatcttgcccggggcggccacaataacaaa
gtacaacaggcgcagcacctaaatgcagggcgcaaaccggtgacccttatttcagaagga
gaatttctaaccctcttacagtatgaagtatcagaagaaccttag
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