Catalinimonas niigatensis: PZB72_12235
Help
Entry
PZB72_12235 CDS
T10977
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
cnq Catalinimonas niigatensis
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnq02000
]
PZB72_12235
Transporters [BR:
cnq02000
]
Other transporters
Pores ion channels [TC:
1
]
PZB72_12235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
Plug
CILP
CooC_C
Motif
Other DBs
NCBI-ProteinID:
WPP53146
LinkDB
All DBs
Position
complement(2957947..2960241)
Genome browser
AA seq
764 aa
AA seq
DB search
MRIFLLQLLVGCLLPVAAWAQLNVTGKVTDAQTNESLAGANVTIAGTTQGTITNSEGEYR
LQVDQTPATLKVSFVGFQTQEVTLSTEVGSVTQNFSLSVARSLEEVMIRAIRADQKIPVT
QKTISRQDIEEIYVGQDALFVLERKTPSILAYSESGTNLTNYGQMRLRGMEQKRINITLN
GVPLNDMIDQGVYFSNFTDFGNSIESVQVQRGVGTSTNGTASYAGSINFESVNLRDSVAS
AEVQLLGGSFGTYRTSGEVKTGLLNDKFAFYTRFTRTTSEGYRRHSGTDAYSFFFSGGYF
GEKDMVKITGFTGRTKNELAYLPVALPDIEADPRTNYVSENDTDDFGQHLIQLEYTRFLS
QQTSLVSSIYYGGAGGDFPAGFPDEEGNFMQINYPLFNDHYGFMSYLNHQSVNGRWDING
GVHAYSFLRENIESIIPNYATPYYQDESRKDELSLFAKASYEVGKLILFGDLQFRTVQLD
MSVDEAFLGQTATIPTRSWTFFNPKVGVTYELNNSANLYASFGRSGREPTRTDILGAAQI
NPFNLADAQDPDAVQAEYVNDFEGGVRVNNGQLSGQANLFYMQFENEIAAIGQAIPEGFI
QLRKNVPSSYRRGIEVDWEYRPITQFSFSGDVTYMQSQIDEYAPEDADQVYTDVEPVISP
EWIVNASLEYRPQSWLSVALSPRYVSESYLEPTNRENLVLPEFFLLDARATFSLGKHSLS
LQLNNLLDNQYYSYGESVDYNGALVPGYFVQPPRNFYAILRLRF
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgagaatttttctattgcagctgctggtaggctgtttgttgccagtagcagcatgggcg
cagctaaacgttactggaaaagtaacggatgcgcagaccaacgaatcattagcaggtgct
aatgtgaccattgcaggtaccactcaaggtaccatcactaattccgaaggagaatatcgt
cttcaggtagatcagacaccggctacgcttaaagtgagctttgtcggttttcagacacag
gaagtgactttaagcactgaagtaggaagtgtaactcagaattttagcctttctgtggca
cgctctctggaagaagtaatgatcagagccattcgcgctgaccagaaaataccggttacg
cagaaaaccatttcacggcaggatattgaagaaatttacgtaggtcaggatgcacttttt
gtgctggaaagaaagaccccatctattctggcgtattccgagtcaggtaccaatctaacc
aattatgggcagatgcgcttgcggggcatggagcagaagcggatcaatatcacactgaat
ggtgtacccctcaatgatatgatagatcagggtgtatatttttccaactttacggacttt
ggcaatagcatagagtcagtacaggtacagcgtggagtgggtaccagcacgaatggaaca
gcttcttacgcaggctccatcaactttgaatcagtcaatcttagagatagtgtagccagt
gcagaagtacaactgctgggtggttcttttggtacctatcgtaccagtggtgaagtaaaa
acagggctgctgaacgataaatttgccttctacacccgctttacccggactacatcggag
ggctaccgccgtcattcaggtacggatgcatactcatttttcttttcgggaggttatttt
ggtgagaaagacatggtaaaaattaccggctttaccggtcgtaccaaaaacgaactggct
tatctaccggtagccttgccggatattgaggctgatcctcgcacaaactatgtctcagaa
aatgataccgatgactttggacagcatctgattcagttggaatacactcgttttctgagc
cagcagacttcactagtatcctcaatttattatggaggagcgggaggtgattttccggca
ggcttccccgatgaggaaggcaattttatgcagatcaattatccgctttttaatgatcat
tacggctttatgtcttatctgaatcatcagtcagttaatggccgatgggatatcaatggt
ggagtacatgcctattcttttttgcgggaaaacatagaatctatcattcctaactatgcc
acaccctattatcaggatgagtcgcgaaaagacgaactgagtttgtttgccaaggccagt
tatgaggtaggcaagctgattctttttggcgatttacagtttcgtacggtacagttagat
atgagtgtagatgaagctttcctgggtcagacagccactattcctacccgcagctggact
ttctttaacccaaaagtgggagtgacttacgaactaaacaatagcgccaatctctatgct
tcttttggaagaagtgggcgagaacccactcgtactgatattctgggcgccgcgcaaatc
aatccattcaatttggccgatgctcaggatccggatgctgtacaggctgaatatgtcaat
gattttgaaggtggagtgcgtgtaaataacggccagctgtctggccaggccaatcttttc
tacatgcagtttgagaatgagattgcagccattggacaagccattcctgaaggatttatt
caactacgcaagaatgtgccgagcagctaccgccggggcatagaagtagattgggagtac
cgacccattacccaattttcctttagtggagatgtgacttatatgcaaagccagatcgat
gaatatgctcccgaagatgcagatcaggtctataccgatgtggagccggtgatcagcccc
gaatggattgtcaatgccagtctggagtatcgtccgcagtcttggttatctgtagcgttg
agtccgcgctatgtaagtgaatcttacctggagcctaccaatcgggagaacctggtgctg
cctgagttctttttgctggatgcaagagcgacattttctttgggaaaacattctttgagc
ctgcaattgaataatctgctggacaaccaatactatagctatggagagtcggtggattat
aacggagcactggtaccaggctattttgtgcaacctccgcgtaacttctatgccatctta
cggttaaggttttaa
DBGET
integrated database retrieval system
