Catalinimonas niigatensis: PZB72_14815
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Entry
PZB72_14815 CDS
T10977
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cnq Catalinimonas niigatensis
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnq03009
]
PZB72_14815 (rimO)
Enzymes [BR:
cnq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PZB72_14815 (rimO)
Ribosome biogenesis [BR:
cnq03009
]
Prokaryotic type
ribosomal protein modification factors
PZB72_14815 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WPP47948
LinkDB
All DBs
Position
3576081..3577397
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AA seq
438 aa
AA seq
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MKTKGIRKDKVNVVTLGCSKNLVDSEVMLTQLKGNQIDASHESEKDDANVIIVNTCGFID
NAKQESIDTILRYADAKQSGMIDKLYVTGCLSQRYRDDLEKEIPEVDAFFGTMELPLLLK
KFKADYKHELVGERFITTSRHYAYLKIAEGCDRPCSFCAIPLMRGKHVSTPIETLVQQAK
SLARNGTKELLLIAQDSTYYGLDLYGKRNLADLLKQLSDVEGIEWIRLHYAFPSGFPMDV
LDVMAERPNICKYLDMPLQHGSSRMLKLMRRGTTREKTEALIHQIREKIPNLTLRTTLIA
GHAGEMEEDHADMMDFVEKMRFDRLGIFTYSHEEGTHAYGMEDNVPYKVKQQRANEVMEL
QEKISCELNQEKIGSVQKVLIDRKESGNYIGRTEGDSPEVDNEVIVPADTNYLRLGDFAD
IRIVDATEFDLFGEPVRK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacaaaaggaatcagaaaagataaagtaaatgtagtcactttgggctgttctaaa
aacctggtagactctgaagtgatgcttacccagctcaagggcaaccagattgatgctagc
cacgagtcagaaaaagacgacgccaatgtgattattgtcaacacctgcggctttatcgac
aatgccaagcaggagtctattgatactatccttcgctatgccgatgccaagcaaagtgga
atgatagacaaactctacgtcaccggctgcctctcgcagcgctatcgcgatgatctggaa
aaggagattcctgaagtagatgctttctttggtaccatggagcttccccttttgctcaag
aagtttaaggcagattataaacacgaattggtaggcgagcgctttatcaccacctcccgt
cattacgcctacctcaagattgccgaaggctgcgaccgtccctgctctttttgtgccatt
ccgctgatgcggggcaagcatgtgtctacgcccatagaaacattggtgcagcaagccaaa
tcattggcgcgcaacggtaccaaagagttgctactcatcgcccaggattctacttactat
ggcctggacctttatggcaaacgtaatctggcagacctgctcaaacaactttccgatgtg
gagggaatagaatggattcgcctgcactatgcctttccttctggcttcccgatggatgtt
ctggacgtaatggctgagcgccccaacatctgcaagtacctggacatgccactgcaacat
ggctccagccgtatgctaaagctgatgcgccgtggcactacccgcgaaaaaacagaagca
ctgattcatcagattcgtgagaagattcctaaccttactttgcgtactaccctcatcgcc
ggacatgccggagagatggaagaagaccatgccgatatgatggattttgtggagaaaatg
cgctttgaccgtctgggcatctttacctattcgcacgaagaaggcacccatgcctatgga
atggaagacaatgtaccctacaaagtaaagcaacaacgggccaacgaggtgatggaactg
caagagaaaatttcctgcgaacttaatcaggagaagataggcagtgtacagaaagtactg
atcgaccgcaaggaaagcggcaactacatcggccgcactgaaggagactcacccgaagta
gacaatgaagtgatcgttcctgccgatacaaattatctgcgcctgggcgactttgctgac
atccgcattgtagatgctaccgaatttgacctctttggcgagccagtgcgtaaatag
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