Catalinimonas niigatensis: PZB72_15550
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Entry
PZB72_15550 CDS
T10977
Name
(GenBank) transporter substrate-binding domain-containing protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
cnq Catalinimonas niigatensis
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cnq01011
]
PZB72_15550
Enzymes [BR:
cnq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PZB72_15550
Peptidoglycan biosynthesis and degradation proteins [BR:
cnq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PZB72_15550
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Lig_chan-Glu_bd
Phosphonate-bd
SLT_2
DUF3150
Motif
Other DBs
NCBI-ProteinID:
WPP48087
LinkDB
All DBs
Position
3742979..3744484
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AA seq
501 aa
AA seq
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MIEIKTYISHIPHTRLLLTFLFLFVFSCSEENGSGQYEHQAEVPDPITFDLDHIRERGSL
VAILNNSSTGYFIYRGQPMGYEYELLTLLATELNLKLQIKLTSDIDEAIYMLNEGEGDII
AFNMAVTSNRQEQVSFTEHHNEVKQVLVQRKPENWHIMKRHEIDDMVIRNPLALDGKTIH
VQRNSAFVTRLKNLSEEIGGKIEIKQAEIGQDSEALIRKVADGEIDYTVADEDVAMVNAT
YYSNIDVSTPISFPQKIAWATRSNAPQLLNEVNDWIREMKKQTDYYVIYNKYYKSPKASL
RRVTSTYSSLSSDKISPFDDIFKQAADSLGWDWRLLAAQAFQESKFDISAESWAGAIGLM
QLLPETGELYGISDMHDPMQSLQAGAAYLSWLDSIWEKYVPDSDERIKFVLASYNAGQGH
VLDARRLAQKFGKNPASWEDVAYFLEKKSEPEFYKDPVVESGYCRGREPVNYVEDILNRY
ERYKQLVNPEMIIASAAETSV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaataaaaacctatatatcgcacatacctcatacccgtctgttactcactttt
cttttcttgtttgttttttcttgcagtgaggaaaatggatcagggcagtatgagcatcag
gctgaagttcctgatcctattacctttgatctggatcatattcgggaaagaggaagcttg
gtagctattcttaataatagttctactggctattttatatatcgcggtcagcctatgggc
tatgagtatgaattacttactctattggctactgaactcaatcttaaattacagattaag
cttaccagtgatattgacgaagccatttacatgttgaatgagggggagggtgatattatc
gctttcaatatggcggtgacttctaaccgtcaggaacaagtttcttttactgagcatcat
aatgaagtgaagcaggtgctggtgcaacgtaaacctgaaaactggcatatcatgaaacgt
catgaaattgacgatatggtaatcagaaaccctttggcacttgatggtaagacaattcat
gtgcaaaggaattcagctttcgtgactcgtttgaagaacctttctgaagagattggaggc
aaaattgaaatcaagcaagctgagattggccaggattctgaagcgctgatccggaaagtt
gcggatggagaaattgactatactgttgctgatgaagatgtagctatggtaaacgccacc
tattattcaaacatcgacgtaagcactcctataagcttccctcagaagattgcctgggct
acccgtagtaatgcccctcaactcttaaatgaggttaatgattggattcgggagatgaaa
aagcagacggattactatgtaatctacaacaaatattataaaagccctaaagcttctctt
cgtagggtaacaagcacttattcttcgctgagcagcgataaaatttcaccctttgatgac
atcttcaagcaggctgcggatagcctgggttgggattggcgtttgcttgctgcacaggca
tttcaggagtctaaatttgatataagtgcagaatcatgggcaggagcaatagggttgatg
cagttactccccgaaaccggtgagttatatggcatatctgacatgcatgatcccatgcaa
agcttacaggcaggagccgcttatttgagttggttggatagcatctgggaaaaatatgtc
cctgatagcgacgaacgtatcaaatttgtattggcctcttataatgccggtcagggacat
gtgctggatgcaagacgtttagcgcaaaaatttggcaaaaaccccgcttcctgggaggat
gtggcttattttctggagaaaaaatctgaaccagaattctataaagatccggttgttgag
tctggctactgccgaggccgtgaacctgtaaactatgtagaggatatcctcaatcgttat
gagcgttataagcagctcgtaaatcccgaaatgattatagcttctgccgccgaaacctcc
gtttaa
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