Catalinimonas niigatensis: PZB72_16425
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Entry
PZB72_16425 CDS
T10977
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
cnq Catalinimonas niigatensis
Pathway
cnq00051
Fructose and mannose metabolism
cnq00541
Biosynthesis of various nucleotide sugars
cnq01100
Metabolic pathways
cnq01250
Biosynthesis of nucleotide sugars
Module
cnq_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
PZB72_16425 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PZB72_16425 (gmd)
Enzymes [BR:
cnq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
PZB72_16425 (gmd)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
Motif
Other DBs
NCBI-ProteinID:
WPP48258
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All DBs
Position
3928726..3929838
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AA seq
370 aa
AA seq
DB search
MKKALITGVTGQDGAYLAEFLLKKGYEVHGIKRRTSLFNTDRIDHLYQDPHEKDLKLKLH
YGDLTDSTNIIRIVQEVQPDEIYNLGAMSHVKVSFDEPEYTANVDGLGTLRILEAVRILG
LQEKTKIYQASTSELYGLVQEVPQSEKTPFYPRSPYAVAKMYGFWITVNYREAYNMFAVN
GILFNHESPIRGETFVTRKITRAAARIALGLQDICYLGNMDAKRDWGHAKDYVQAMWLIL
QQEKAEDYVIATGITTTVRDFVRMSFKELGIELKFEGEGVNEVGKITSCSNPDFQLEVGK
EVIKVDPEYYRPTEVELLIGDPTKAREQLGWKLEYTLETLVKDMVHSDVALFKRDKFLMK
GGHKVYSYHE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggcgttaatcacaggagttaccggacaagacggtgcttacttagccgagttt
cttctaaaaaaagggtatgaagttcatggaatcaaacgtagaacttccctattcaacact
gatcgcatagatcatctctatcaagatccacatgagaaagatctgaaactgaagctgcat
tatggcgatttgacagattctaccaatatcattcgcattgtacaggaggtacaacccgat
gagatttataatctgggcgctatgtctcatgtaaaagttagtttcgatgagcctgagtat
actgccaacgtagatgggttaggtacgctgagaatattagaggcagtacgtatattagga
ctacaggaaaaaaccaaaatataccaggcgtctacttcagagttgtacggtctggtgcag
gaagtacctcaaagtgagaagactcctttttacccacgttctccttatgcagtagctaag
atgtacgggttctggattactgtcaactaccgtgaggcttacaatatgtttgcagtcaac
ggaattcttttcaatcacgaatctccaatcagaggggaaacttttgtgacccgcaaaatt
actcgcgcagcagcacgtattgctttgggattacaggatatctgttacctgggaaatatg
gatgccaaacgtgactggggccatgccaaagattatgtgcaggccatgtggctaatcctt
cagcaggaaaaagcagaagattatgtaattgctaccgggataaccacaactgtacgtgat
tttgtgcgtatgtcgtttaaagagctgggtatagagctaaaatttgagggtgaaggcgta
aacgaggtgggcaagataacaagttgctctaatccggattttcaacttgaagtaggaaaa
gaagttatcaaagtagaccctgaatactaccgtcctacagaagtggagcttttgatcggt
gatcctaccaaagcccgcgaacaattaggttggaagctggaatatactttggaaactttg
gtgaaagatatggtacactcggatgttgcgttgttcaagagggataaattcctcatgaag
ggcggacacaaagtgtacagttatcatgagtaa
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