Catalinimonas niigatensis: PZB72_17230
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Entry
PZB72_17230 CDS
T10977
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
cnq Catalinimonas niigatensis
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnq02000
]
PZB72_17230
Transporters [BR:
cnq02000
]
Other transporters
Pores ion channels [TC:
1
]
PZB72_17230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
TTR_TEN1-4
CooC_C
Motif
Other DBs
NCBI-ProteinID:
WPP48417
LinkDB
All DBs
Position
complement(4119802..4122816)
Genome browser
AA seq
1004 aa
AA seq
DB search
MRIFTQLRYVLTLLGVFCIASVTYAQTTVSGKVTAPEEGSLPGVNVLVQGTSTGTVTDMD
GNYNLTVPAGSDVLVFSSIGYVTQEITINGRSTINVELQADVQSLSEVVVIGYGTQEKRD
ATGAVSSIKSEDFNSGVIASPEQLIQGRAAGVQITQASGEPGSGVNIRIRGTSSVRGGNN
PLFVVDGVPLAGEDVSGGGTDVGAGSSSARNPLNFLNPNDIASIDILKDASATAIYGSRG
ANGVVLITTKTGQAGKSTLNYSYNIGVSNITKKYDLLDADEFVAAYADINGLAPGAEALE
TLDLGSNTDWQDELFRTAITHNHDLSYSGGSDAGSYRLSLGYTDQEGIVERSGLRRLSAR
FNGTSNFINDRLTISTQVTVSDIRDNNVPISDNAGATGDLLGAALKLNPTYPVYQDGELY
QRSVTELNPVAFLELSNDYTNTVRALGNVTFDFQIIEGLNFKTVLGGDRSASTRKAGYSP
DLVVQGIVGQGRAAFDDISTINTLMENYFTYNKDLSDNLRMDAVVGYSYQRFQRETKFTQ
AAGFRVTDLDLILNNLASVNYTSGLGGLVGNSSFRVDELQSFFGRVNFDIADKYLLTATV
RADGSTRFGSDYRYGVFPSFAAGWRLSDEAFLPEAFSDLKLRAGYGITGNQEFPSNRYTS
RQRYSGEGFNVSPTGVTINPSSRLPVAFENPALRWESTTQINLGVDWGFFNNRLRGSIDY
YNKTTNDLLFVTLSAQPAPTDFVWENLDMDVINQGVEVVVDADVVDNDAFSWSISANASY
NDNKIENYDGLVNTGEISGQGLSGAFAQRIANNQPLFAYYLRPFAGFDDAGQSIYPEGDV
QQFVNRSPLPKYNLGFTNNFNYERFDLSIFFNSQLGQYVYNNTENAYFTAGALGGGNNVT
VDVIGNGESRANAPEVSTRFLEDASFVRLQNFTLGYNFNTDGIEFLSGLRLYFTGQNVFV
ITDYSGQDPEVNVNKSLNDVPSFGIDYTPYPRARTFLMGLNITF
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgagaatttttacacagcttaggtatgtcctaacgctgcttggtgtattctgcatcgcc
agcgtaacttatgcgcagactacagtatcaggtaaagtaacggctcctgaggaaggctct
cttcccggtgtaaacgtattggtacagggaacttctaccggtaccgtaacggacatggat
ggcaattacaatttaacggtaccggccggtagtgatgtattggttttttcttccatcggt
tatgtaacgcaagaaattacaatcaacggacgttcaacaatcaatgtagaactacaggcg
gatgtccagtcgttgagtgaagtggtagtaattggctacggtacacaagaaaaaagagat
gctaccggtgcagtctcctctatcaaatcagaagattttaacagtggagtaattgcttct
cctgaacaattgattcagggacgagcagcaggtgtacaaatcacccaggcaagtggtgaa
cctggttctggggtgaatatcagaattcgcggaacctcttctgtacgtggtggaaataac
cctttgtttgtagtagacggtgtacctctggcaggagaagatgtaagtggagggggaaca
gatgtaggagcaggttcttcatcagccagaaacccgcttaacttccttaatcctaatgac
attgcaagcatagatatcctcaaagatgcttctgccacggcaatttatggttcacgtggt
gccaacggtgtagtgcttatcactaccaaaaccggacaagcaggtaaaagcacattgaat
tactcctataatattggggttagcaacatcaccaaaaaatatgaccttttggatgctgat
gagtttgtagctgcatatgctgacatcaacggccttgctcccggagctgaggcattggaa
actctggatcttggatctaatacagactggcaggatgaattattcagaacagcgattact
cacaatcacgacttgtcctacagtggaggaagtgatgcaggttcatatagactttctctg
ggctatacagatcaggaaggtatagtagaaaggagtggattgagaaggctttctgctcgt
ttcaacggaacaagtaattttatcaacgatcgtctaaccataagtacccaggtaacggtg
tctgacattcgtgataataacgttcctatttctgacaatgcaggtgccaccggtgacctt
ttaggagctgccctaaagctcaaccctacttatccggtgtatcaggatggtgaattgtat
caaagaagcgtaacagaattaaaccctgtagcattcctggagcttagcaatgactacacc
aatacagtgcgggcattgggtaatgtcacctttgattttcaaattattgaagggcttaat
ttcaaaacagtactgggtggtgaccgttcagcctcaactcgtaaagcaggctattctcca
gacttggtggtgcagggtatcgtaggacagggacgtgcagcctttgatgatatttcgacc
ataaatacactcatggagaattattttacttacaacaaagacttgagtgataacctgcgg
atggacgctgtggtagggtattcttaccagcgttttcaaagagagactaaatttactcag
gctgctgggtttagagtgacagatctggatctgattctaaataaccttgcctcggttaac
tatacatcaggccttggagggcttgttggaaactcttcttttagagttgatgaattgcag
tcattctttggccgcgttaattttgacattgcggacaagtatcttttgacggctacagta
agagcagacggctcaacccgttttggtagtgattaccgatatggtgttttcccttcattc
gctgctggctggcgactttccgacgaagcttttctgcctgaagcattcagcgacttgaaa
ttaagagcaggttatggaattacgggtaaccaggagtttcccagcaaccgctataccagc
cgtcaacgctacagcggagaaggttttaacgtatctcctacaggggtgactattaatcca
agcagcaggcttccggtagcatttgaaaaccctgcactgagatgggaatctactacacag
atcaatttaggggttgactgggggtttttcaataatcgtctcagaggttccatagattat
tacaataagaccaccaatgatctgctatttgtaacccttagcgcacagcctgcacctact
gattttgtctgggaaaacctggacatggatgtaattaaccaaggtgtagaagtagtggtt
gatgccgatgtagtagacaatgatgctttttcctggtcaatttcagccaatgcatcctac
aatgacaacaaaatagaaaattacgatggcttggtaaacactggtgagataagcgggcaa
ggattgtccggtgcgtttgctcagcgtattgccaacaatcaaccgctttttgcctactat
ctgcgacctttcgcaggttttgatgatgcagggcaaagtatttatcctgaaggtgatgta
cagcaatttgtaaatcgtagtccattacctaaatacaatcttggttttacgaataatttc
aattatgaaagatttgacctaagtatattcttcaacagccaattaggtcaatatgtctat
aacaatacggaaaatgcatactttactgccggagcactgggaggaggaaataatgtgact
gtagatgttatcggtaatggtgagtctcgtgctaatgctcctgaggtttctacacgtttt
ctggaggatgcctcttttgtaaggctgcaaaactttactttggggtataacttcaataca
gacggtatagaattcttatccggcttgagactctacttcaccgggcagaatgtgtttgtg
attacagactatagtggacaggaccctgaagtgaacgtaaataaatccttaaatgatgtg
ccttcttttggtattgactatacaccatatccaagagcaaggacattcctgatgggactt
aatattacattttaa
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