Catalinimonas niigatensis: PZB72_18125
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Entry
PZB72_18125 CDS
T10977
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cnq Catalinimonas niigatensis
Pathway
cnq00521
Streptomycin biosynthesis
cnq00523
Polyketide sugar unit biosynthesis
cnq00525
Acarbose and validamycin biosynthesis
cnq00541
Biosynthesis of various nucleotide sugars
cnq01100
Metabolic pathways
cnq01110
Biosynthesis of secondary metabolites
cnq01250
Biosynthesis of nucleotide sugars
Module
cnq_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PZB72_18125 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PZB72_18125 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PZB72_18125 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PZB72_18125 (rfbB)
00525 Acarbose and validamycin biosynthesis
PZB72_18125 (rfbB)
Enzymes [BR:
cnq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PZB72_18125 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WPP48590
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Position
complement(4353341..4354396)
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AA seq
351 aa
AA seq
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MNTTKKILITGGAGFIGSHVVRLFVNTYPQYRIYNLDKLTYAGNLENLMDIEDKPNYTFV
RGDISDANFINSFFEETKFDAVIHLAAESHVDRSIKDPMAFITANVIGTVTLLNAAKAIW
KDDMDKHLFYHISTDEVYGSLDNGGFFLEDTPYDPKSPYSASKASSDHFVRAYHNTYNLP
VIVSNCSNNYGPYHFPEKLIPLCINNIQNKKPLPIYGKGENVRDWLFVEDHARAIDVIFH
KGKVGDTYNIGGFNEWKNIDIVRLLCKIMDKKLGRAEGESEKLITFVKDRAGHDLRYAID
ANKLMNELGWKPSLQFEEGLEKTVDWYLANEKWLQHITSGDYKKYYEEQYE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaataccactaaaaaaatactgatcaccggtggcgctggctttattggctctcatgtc
gtcaggctgtttgtgaatacatatcctcaatatagaatatacaatctggataaacttacc
tatgccggtaatctggaaaacctgatggatattgaggataaacccaattatacttttgtt
cgtggtgatatcagtgatgctaactttatcaacagtttttttgaagaaactaagtttgat
gcagtcattcatctggcagcagagtcgcatgtagaccgttctatcaaagatcccatggca
ttcatcactgccaatgtaattggtacggtaaccctccttaatgctgccaaagcgatctgg
aaagatgatatggataaacaccttttctaccatatttctaccgacgaagtgtatggctcg
ctagacaatggaggtttctttttggaagatactccttacgatcccaaatcaccttactca
gcatccaaagccagttccgaccattttgtaagggcttaccacaatacctataatttaccg
gttattgtcagcaactgttctaataactatggtccttatcactttccagaaaagctaatt
ccgctttgtatcaacaacattcaaaataagaaaccacttcccatttacggaaagggagaa
aatgtacgcgactggttgtttgtagaagaccacgctcgtgccattgatgtcatctttcat
aaaggtaaggtaggcgacacctacaatattggtggtttcaatgaatggaaaaacattgac
atcgtccgtttgctctgcaaaattatggacaagaagctgggcagagccgaaggagaatcc
gaaaagctaatcacttttgtaaaagatcgtgccgggcatgacctgcgctatgccatcgat
gccaataagctgatgaacgaactgggctggaaaccttctttgcagtttgaagaaggtcta
gaaaaaacggtagactggtacctggccaatgaaaaatggcttcagcacattacttccggc
gactacaaaaaatattacgaggaacagtacgaataa
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