Catalinimonas niigatensis: PZB72_20285
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Entry
PZB72_20285 CDS
T10977
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cnq Catalinimonas niigatensis
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnq03400
]
PZB72_20285
Enzymes [BR:
cnq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PZB72_20285
DNA repair and recombination proteins [BR:
cnq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PZB72_20285
Prokaryotic type
PZB72_20285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Agarase_CBM
Motif
Other DBs
NCBI-ProteinID:
WPP49009
LinkDB
All DBs
Position
complement(4872014..4873528)
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AA seq
504 aa
AA seq
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MLNFCQHFLVCSRVEKSSINIVWFKRDLRLTDHAPLHYAILSQRPTLLLVFLEPSLMAAP
ESSIRHWRFVYESVLEMQHKLAQHQIKFYLFHQEVLAVLQEVHKTYCIAQLYSYQESGLN
ITYERDKAVAAFCKKSNIPWHEYENNAVVRGLKNRDQWSEHWQIFMQSKEDGVQLRKLIP
FQLEPSFYEKHQGKILDQNITTPNADFQPGGNAYALKYLVSFMKERASQYGKHISKPELS
RKSCSRLSPYIAWGNISVRQVYQTAEAFKGWVAHKHQLRNFIARLRWQAHFIQKFESECR
IEFENFNKGYDNIRTSWNEAYFQAWKAGMTGYPLVDAAMRCVNRSGYLNFRMRAMLVSFL
THHLWLPWKAGATHLAQQFLDFEPGIHYSQIHMQAGTTGIHTIRVYNPVKQSLSHDLEGI
FIRKWVPEIAHLPQAFMHQPWKMTSLEQDMYHCKLGEDYPYPVVDLKKSGKHARNQLWLI
KEQENVRSEGDKILAKHTTKNREV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaacttttgccaacactttctggtttgttccagagtggaaaaaagtagcattaac
attgtctggttcaaacgtgacctgaggctcacagatcatgctcccttgcattatgctatc
ctaagtcagcgccctacgcttttactcgtttttttggaaccttctttgatggctgctcca
gaaagcagcatccggcattggagatttgtatacgaatcggtattggagatgcagcacaag
ctggcacagcatcagatcaagttctatctttttcatcaggaggtgctggccgttttacag
gaagtacacaaaacttactgcatcgcccaactgtattcatatcaggaaagcggattgaat
attacttatgaacgagacaaggcagtagctgctttttgtaaaaaaagtaatataccatgg
catgaatacgaaaataatgctgtggtccgtggattaaaaaatcgggatcagtggagtgag
cattggcaaatattcatgcaaagtaaggaggatggagtacaacttagaaaactcattcct
tttcagctggaaccctcattttatgaaaagcatcaaggaaaaatacttgatcaaaatatc
accacacctaatgctgactttcaaccgggaggcaatgcgtacgcattaaagtatctggta
tctttcatgaaagaacgtgccagtcagtatggcaaacatatttctaagcctgagttgagc
aggaaaagctgtagccgtttgtcaccatatatagcctggggcaatatatccgtcaggcag
gtgtatcagacggcagaagccttcaaaggctgggtagcacacaaacatcagctcaggaac
tttattgccagattgcgatggcaggctcattttatacaaaagtttgaatccgaatgccgt
attgagtttgaaaattttaacaaagggtacgataatatccgcacatcctggaatgaagct
tattttcaggcctggaaagcaggaatgacgggctacccactggtagatgccgccatgcga
tgtgtgaatcgtagcgggtatctcaatttcaggatgcgcgctatgttggtatcctttctc
acccatcatctgtggctaccctggaaggctggggccacgcatctggcacagcagtttctt
gactttgagcccggtatccactattcccaaattcacatgcaggcaggtaccaccggcatt
cataccatccgggtttacaatcctgtcaaacagtctttgtcgcacgatcttgaaggaata
tttattcgtaaatgggtgccggaaatcgcccacctccctcaggcatttatgcatcaaccc
tggaaaatgacaagtcttgaacaggacatgtatcactgtaagctgggagaagattatccc
tatcctgtcgtagacctgaagaaaagcggtaagcatgcccgcaaccagctttggctgatc
aaagagcaggaaaatgtcagaagtgaaggcgataaaattttagcaaagcatactaccaaa
aacagagaggtatga
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