Catalinimonas niigatensis: PZB72_20720
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Entry
PZB72_20720 CDS
T10977
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cnq Catalinimonas niigatensis
Pathway
cnq00300
Lysine biosynthesis
cnq00470
D-Amino acid metabolism
cnq01100
Metabolic pathways
cnq01110
Biosynthesis of secondary metabolites
cnq01120
Microbial metabolism in diverse environments
cnq01230
Biosynthesis of amino acids
Module
cnq_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PZB72_20720 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PZB72_20720 (dapF)
Enzymes [BR:
cnq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PZB72_20720 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
WPP49095
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Position
4981112..4981888
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AA seq
258 aa
AA seq
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MNTLHFYKYQGTGNDFVMIDNREGKFPQHDEQLIQRLCHRKFGVGGDGLILLQDHEQYDF
EMIYYNADATQSMCGNGSRCAVHLAHHLGMIGKHSQFYAEDGPHEATIEDELIHIRMVDV
VGIEEKEEGYFLNTGTRHYVRLVEDLADFDVMGVGKKIRYHESFMPQGTNASFTEIKEGE
VHMRIYEKGVENETLSSGTGVTAVALALDKAKGLNSPAKINTQGGVLQVAFRKVREDFYT
DVYMIGPAVMVFEGTVFV
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattgcatttttataaatatcagggtacaggcaatgactttgtgatgattgat
aatcgggagggaaaattccctcaacatgatgaacaactgatacagaggctatgtcatcgc
aaatttggggtaggaggcgacggacttatacttttacaggaccatgagcagtatgatttt
gaaatgatctactacaatgcggacgctacccaaagcatgtgtgggaatggtagccgttgt
gctgtacacctggcccatcatttgggcatgattggtaaacactcccagttttatgccgag
gacggaccacatgaggctacgattgaagatgaacttatccatattcggatggtagatgta
gtaggtattgaagaaaaggaagaaggctacttcctcaacaccggaacacgtcactatgtc
aggctggtagaagatctggcagactttgatgtgatgggagttggaaagaaaattcgttat
cacgaatcatttatgccccagggaaccaatgcaagctttacggaaatcaaagagggagaa
gtacatatgcggatctatgaaaagggggtagaaaatgaaaccttatcctcaggaacaggg
gtaacagccgttgcgctcgcccttgacaaagccaaaggccttaacagtccggcaaaaatc
aatacacagggaggagtacttcaagtagccttccgtaaagtaagagaggatttctacact
gatgtatatatgattggcccggctgtcatggtttttgagggcactgtttttgtgtaa
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