Catalinimonas niigatensis: PZB72_21190
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Entry
PZB72_21190 CDS
T10977
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cnq Catalinimonas niigatensis
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnq02000
]
PZB72_21190
Transporters [BR:
cnq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PZB72_21190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_12
TPR_6
TPR_14
TPR_16
TPR_19
SusD-like
TPR_1
DUF7500
Motif
Other DBs
NCBI-ProteinID:
WPP49186
LinkDB
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Position
5104239..5105738
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AA seq
499 aa
AA seq
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MKYISYTLCTFLCWMIVGCEDILEKEPLALISTTNAYITEADATRAVTAAYHPLMANNWC
CGAWGNSGFMHWVLGNVASDDTEKGGESGSDQLYAQQVSLFNIPSDNDATRFAWSSQYIG
IRRANLVLDNVPDIEMDADLKARYLAEAKFLRAWYYSNLVKTFGDVPLVLTTELEAYDLT
RAPKQEVYNQIIQDLQEAMAVLPAEYDDAERGRATRGAAQAYLGKVYLYLNDFPMAEEMF
GQVINSGTYSLDPDYYGMFLREGENSPEHIFQVQFHNDQGAQPANNQLNTVFASRARNGW
GFNLPTQDFVDAFEEGDPRLNHTVYKTGDVMPDGLIANVGNSTTGYLNKKYYVPEYERVG
GALQPGRDDIYMRLGKVMLWYAEAANENGNTQEALDALNQIRERAREGNPDVLPDITETD
QDALRELIWHEQRVEFGQEFERFYELVRQGRAGEVMRGYAEKYNTAKGSGYTDGVNEIFP
IPQAEINLSGGVLSQNQGY
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacatatcatatacattatgcacttttttatgctggatgatcgtagggtgcgag
gacattcttgaaaaggaacccctggcattgattagtactaccaacgcctacattaccgaa
gcagatgctaccagagcggtaaccgcggcataccatcctcttatggccaataactggtgc
tgcggtgcctggggaaatagcgggtttatgcactgggtactgggtaatgtggcctctgat
gatactgaaaaaggaggagagtccggctctgatcaactatacgcgcagcaggtttcgctt
ttcaatattccgtctgataatgatgcgacgaggtttgcctggtcttcccagtatattggg
atacgccgcgccaatctggtactggacaatgtccctgatatagaaatggatgcggacctt
aaagctcgctatctggctgaggctaagtttttaagagcatggtactactctaatctggtc
aaaacctttggcgatgtgccattggtgcttaccaccgaactggaagcctatgatttgacc
cgagcgcctaagcaagaagtgtacaaccagatcattcaggatttgcaggaagctatggcc
gtgttacctgctgaatacgatgatgcggaaagaggacgtgctaccagaggggctgcgcag
gcttatttggggaaagtctatttgtatctgaatgattttcctatggcagaagaaatgttt
gggcaagtcatcaattcaggcacctattctttagatccggattactacggtatgtttctc
agagaaggagagaacagccctgaacatattttccaggtgcaatttcataacgatcagggt
gcacaaccggctaacaatcaactgaatactgtatttgcaagcagagccagaaatggctgg
ggctttaatttacctactcaggattttgtggatgcttttgaggaaggcgaccctcgtttg
aatcatacggtttacaaaacaggtgatgtaatgcctgatggactcattgccaatgtaggc
aacagtacgaccggctatctgaataagaaatattatgtacctgagtatgaaagagtcgga
ggagcgttgcaaccgggtagagatgatatctacatgcgcttgggcaaggtcatgctatgg
tatgccgaagcagccaacgaaaatggaaatactcaggaagcactcgatgccctgaatcag
atacgtgaacgtgccagagaaggaaatccggatgtattgcctgatattacagaaacagat
caagacgcacttcgggaattaatctggcatgagcagcgtgtcgagtttggacaggagttc
gaacgtttttatgagctagtacggcagggacgtgccggtgaggtaatgcgtggctatgct
gaaaaatacaatacagcgaaaggctcgggttatactgatggagtgaacgaaatatttccc
ataccacaggctgaaataaatttaagtggaggagtcctctcacaaaaccagggctactaa
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