Catalinimonas niigatensis: PZB72_23140
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Entry
PZB72_23140 CDS
T10977
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
cnq Catalinimonas niigatensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_N
TetR_N
UPF0122
AraC_binding_2
HTH_6
DUF4143
ExsA_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
WPP49572
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All DBs
Position
5618929..5619840
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AA seq
303 aa
AA seq
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MNDQLLDKLKPEQIIENRKVYSGDQAELCVYETFQEAELVNYGHLDNPVLLFMLSGKKVI
HESEQKQHRAFDFNPGESLVMAPHELVQIDFPDASAHQPTRCLTLEIGRSLISHTFSQLQ
EELTKDISEELITEDQLTYESLHDARINNAIHRICSYYTQAMDSTARKLLISHTLQELII
LMMQTKARHILLHNSSTEMPRLQSVVDYIMEHIQEDMSVEELAEKACMSKATFHRYFKKV
LGFSPVDFVNRKRMQIAKQLLLQDSKAVSDVCYAVGYNSTSHFIRSFKKQFGYTPKQYQK
SHF
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccaactgcttgacaaactcaagcctgagcaaattattgaaaaccggaaagta
tatagtggtgatcaggctgagctatgtgtgtatgagacttttcaggaagcagaattggtc
aactatgggcatctggataatccggtactgctgtttatgttgagtggaaaaaaagtgatt
cacgaaagcgaacaaaagcagcatcgtgcctttgattttaatccgggagagtctttggtg
atggcaccccacgaactggtgcagatagactttcctgatgccagtgctcatcagcctacc
cgatgcctcacattggagataggccgctccctcatcagccatactttcagccaactacag
gaagagctgaccaaagatatcagtgaggaactcattacggaagatcagttaacctatgag
agtctccatgatgcccgtatcaacaatgccattcaccgtatctgtagctactatacccag
gcgatggacagcactgcccgtaagctgctcatcagtcatacgctacaggaattgatcata
ctgatgatgcagaccaaagcccgtcatatcctgctccataacagcagcacggaaatgccc
cggctacaatcagtggtggattacatcatggagcatatacaggaagatatgagtgtagaa
gaactggccgagaaagcctgcatgagcaaagctacctttcatcgttatttcaaaaaagtg
ttgggcttctcaccggtagactttgtaaacaggaagaggatgcagatcgccaagcaactg
ctgttgcaggatagcaaagcggtgagtgatgtgtgctatgccgtaggttataacagtact
tcacacttcattcgctccttcaaaaagcagtttggctacacccccaaacaataccaaaaa
tcacacttttag
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