Catalinimonas niigatensis: PZB72_26035
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Entry
PZB72_26035 CDS
T10977
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cnq Catalinimonas niigatensis
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cnq01011
]
PZB72_26035
Enzymes [BR:
cnq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PZB72_26035
Peptidoglycan biosynthesis and degradation proteins [BR:
cnq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PZB72_26035
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
WPP50128
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Position
6315208..6316608
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AA seq
466 aa
AA seq
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METKGKYYFLSLSIAFIFLSTCTDIEQRISSADIEEDSTDTTQLPTQESELSTIDAVMAI
FSNAEPEDTQSDTEKFTAAYLDSTTGKLFLHPVYTFQNNPYGFEEDELVSYPDSVYQKRF
ANMTSEIPLVYNRHVENFIDLYAIRKKNLTERMFGKSMLYFPYIEKVLMEEELPHDLKYL
TMVESALHPDAKSHMEAVGLWQIRYRTGKWLGLEINDFLDERMDPYQSTKAAVAYLKRLY
TNYGSWPMALAAYNSGPGNVNRAIVRAGGSRDYWKIRKYLPVETQSYVPAFMAIIYINRY
QQEHNIRPIVPDIPFQAVDTVRIYKEISFTKLADALEMSEESLAFLNPALTQWVIPSSRQ
GWPLVLPMDKMAIIEEKKPDLFSHRLQNEVASTAQVLKKRKEIVPEATDLKLLEHTVRRG
QTMNGIAKRYGVDLSQIRDWNAMRDNTIRAGQVLKLYVPESEFARY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaagggaaatattattttttaagtcttagtatcgcttttatttttttgagt
acctgtacagacattgagcaaagaatttcgtcggcagatatagaggaggattctaccgat
accacccagttgcctactcaggaaagtgagttgagtactatagatgctgtaatggctatt
ttcagcaatgctgagcctgaagatacccaaagtgatactgaaaaatttacagctgcttat
ctggatagtactactggtaagctgttcttacatcctgtatatacttttcagaacaatccc
tacggttttgaggaggatgagctggtaagttaccctgactcagtttatcaaaaacgcttt
gccaacatgacatcagaaattcctctggtctataatcggcatgttgaaaactttatagac
ctctatgctatccggaagaagaacctcaccgagcgcatgtttggtaagagcatgctttat
tttccctacatagagaaggtattaatggaagaagaactaccgcatgacctcaagtatttg
actatggtagaatctgctttacatcccgatgcgaaatcccatatggaggcagtgggtttg
tggcaaatccgataccgtaccggtaagtggctgggtctggaaattaacgattttctggat
gaaagaatggacccttatcagtctaccaaagctgcagtagcttatcttaagcgtttgtat
actaattacggaagttggccaatggcgcttgctgcttacaatagtggcccgggcaatgtc
aaccgagcgatagtcagggcaggagggagccgggattactggaaaatcaggaaatattta
cctgttgaaacccaaagctatgtacctgcttttatggctatcatttatataaaccgctac
cagcaggagcataatatacgtccgatagtaccggatatcccttttcaggcggtagatacc
gtgagaatatataaggaaataagctttaccaagcttgccgatgcacttgaaatgagtgaa
gagagccttgctttccttaatccggcacttactcagtgggtcatcccttcttcaagacaa
ggttggcctttggttttgcctatggataaaatggccatcatagaagaaaaaaaaccagat
cttttttcacatagattacaaaatgaggtggctagcacagctcaggtactaaaaaaaaga
aaggaaatcgtgcccgaagctactgatctaaagcttcttgaacataccgttcgtcgtggc
cagacaatgaatggtattgccaaaagatatggcgtagatttaagccagatcagagactgg
aatgctatgcgtgacaacaccatccgtgcaggacaagtgctcaagctgtatgtgcccgag
tcggagtttgcccgttactga
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