Catalinimonas niigatensis: PZB72_27100
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Entry
PZB72_27100 CDS
T10977
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cnq Catalinimonas niigatensis
Brite
KEGG Orthology (KO) [BR:
cnq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnq02000
]
PZB72_27100
Transporters [BR:
cnq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PZB72_27100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_19
TPR_10
TPR_7
TPR_6
SusD-like_2
TPR_12
TPR_4
TPR_14
TPR_2
TPR_16
ARM_TT21_C
Motif
Other DBs
NCBI-ProteinID:
WPP50338
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All DBs
Position
6572444..6573940
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AA seq
498 aa
AA seq
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MKKLNILFILLGLALPACQDDFLSIVPETSLSSATFFTKEADFQQAVNGAYVPLRSIVND
RAWLLGEMHSDNTYFARNPLFGATEQQEDIADFAIPSDDGITTNVHVLNQYRLDYQIIAR
TNQILSQIDDVEFSAESKANLKGQAFFLRAYAYFELVRYFGSVPLHLTPVTVRQEAALPL
SPEEAIYAQIVQDAQEAVNLLPPKSVQEAGRATSGAAKTLLANVYINQEKWAEAEALLRE
VVNSNEYALMDDYADAFPGNSSNKNNMESVFEVQFQEGSAGLNGSFIYNFMPRPIAAEEL
VLITGTSNPQPLTGEGNNIPTPDIIAAYEEGDEREEASIGYIYLDGSPWTDGVYPYIKKF
AEPHSLHGNHGMNWPIYRYSEVLLLLAEALAEQGETGEAEGYLQQVRERAGLGAYQGNLL
DAIYRERRVELAFENKRWFDLVRTGRAMEVITAYGNRIKANPLAYYYPEGTEPRGNAFTN
ISLYYALPADEADLSPHF
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactaaatattctattcatattattaggattagcactgcccgcctgccaggac
gattttctatccatcgttcctgaaacctctttgagctcggctactttctttaccaaagaa
gcggattttcaacaggctgtcaacggagcctatgtgccgctacggagtatcgtcaacgac
agggcctggcttttgggtgagatgcattccgacaatacctactttgcccgtaatcctctt
tttggagctactgaacagcaggaggatattgcggactttgccattcccagtgatgacggt
atcaccaccaatgtacatgtgctgaaccagtaccgtctggattatcagatcattgcccgt
accaatcagattttgtcgcaaatagacgatgtagagttcagtgctgaatcaaaagcgaac
ctgaaaggccaggcattcttcctgagagcttatgcttactttgaacttgtacgttatttt
ggcagtgttcctttacacctgactccggtcacagtacgccaggaagccgcattaccattg
tctccagaagaagctatctatgcccagattgtacaggatgcgcaggaagccgttaatttg
ttgccacccaaatctgtgcaggaagcaggaagggcaacttccggtgctgcaaaaacactg
ctggccaatgtatatattaaccaggaaaaatgggcagaagcagaagcgctattgagagaa
gtagtgaatagcaatgaatacgctctgatggatgattatgcagatgcttttcccggtaac
tccagcaataagaacaatatggagtcggtatttgaagtacagtttcaggaaggatcggca
ggattgaatggcagctttatttataattttatgcctcgcccaattgctgccgaggaactg
gtattgattaccggaacctctaaccctcagcctttgactggagagggaaataatattcct
acgcccgatatcattgcggcttatgaagagggagacgaaagggaagaggcttctatagga
tatatttatcttgatggtagtccctggactgacggtgtgtacccttatatcaaaaaattt
gctgaacctcattctctacatggtaatcatggcatgaactggcctatttaccgctactct
gaagtcctgctattactggcagaagctctggcagagcaaggtgaaaccggagaggccgaa
ggatatctgcagcaggttcgggaaagggctggtttgggtgcatatcagggcaatctgttg
gatgccatttacagagaaagaagggtggaactggcttttgaaaacaaacgctggtttgac
ctggtcagaacaggtagagcgatggaggtaatcactgcttatggaaatagaatcaaagcc
aatccactggcttattattatcctgaaggaacagagcccagaggtaacgcttttaccaac
atcagtttatattatgcgcttccggctgatgaagcagatttgagtccacacttctag
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