Cloacibacterium normanense: EB819_00025
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Entry
EB819_00025 CDS
T05730
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cnr
Cloacibacterium normanense
Pathway
cnr03410
Base excision repair
cnr03430
Mismatch repair
cnr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EB819_00025 (recJ)
03430 Mismatch repair
EB819_00025 (recJ)
03440 Homologous recombination
EB819_00025 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnr03400
]
EB819_00025 (recJ)
DNA repair and recombination proteins [BR:
cnr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EB819_00025 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EB819_00025 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EB819_00025 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
AZI68354
UniProt:
A0A1E5UB06
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All DBs
Position
complement(3218..4927)
Genome browser
AA seq
569 aa
AA seq
DB search
MSQKWIYKPAPDEEIVDSISSSIGFGTLESKILVLRGIDDYQKAREFFKPKLEDIHSPFL
MKDMQLAVDRIASAIENGEKILVYGDYDVDGTTAVSLMYLYLSKIVEKKYLDFYIPDRYS
EGYGISDEGINFAKENGFSLIIALDCGIKALDKIEYASSLGIDFIICDHHLPGEELPKAF
AVLDPKRTDCRYPYKELSGCGVGFKLCQGLNTIYKIPENELYELTDLLAISIAADIVAMT
GENRVLAKLGLKTLRKTRKLGIRLLIPEEKIATFDISNIVFEIAPKINAAGRISHGKAAV
ELMISDNLKHAHQIVDDILNLNDSRRELDANTTQSAFNQVIETQQENNFTTVVYHNEWNK
GVIGIVASRLTEVYYKPTLVFTDGNNGEMVASARSVSDFDVHEALEACSEYFLKFGGHQA
AAGLSMEKDKFEAFKEKFEKVVAEKIQEHQKFPSITIDSVIEIEDLNRDFFNFHRKLSPF
GPHNMKPVLELRNQKVSGYVKQMGKDGNHLKFYIHQPVSGRNIECIGFKLGQYMDDFKTK
NFDIAFTVEENHWKGNVTYYLNIRDVKFH
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaaatggatatataaaccagcacctgatgaagaaattgtagacagcatcagt
tcttcaattggtttcgggactttagaatcaaaaattttggttctaagaggcattgatgat
taccaaaaagccagagaattcttcaaaccaaaattagaagacattcacagtccgtttttg
atgaaagatatgcaattggcagtagacagaattgcctctgcaatagaaaacggcgaaaaa
atcctagtttacggcgattatgatgtagacggaactactgcagtttcgctcatgtatctt
tatctttctaaaattgtagaaaaaaaatatttagatttctatattccagaccgttattct
gaaggctatggaatttctgatgagggaattaattttgctaaagaaaacggattctcgctt
atcatcgcattagattgcggaattaaagcattagataaaatagaatatgctagttctcta
ggtattgattttattatttgcgaccaccatttaccaggcgaagaattaccaaaagctttt
gccgttttagacccgaaaagaaccgattgtagatatccttacaaagaactttctggttgt
ggagttggctttaaattatgtcaaggtcttaataccatttataaaattccagaaaacgaa
ctctatgaacttactgatttactcgctatttctattgctgcagatattgtagcaatgact
ggcgaaaatagagttttggcaaaactgggattaaaaacattaagaaaaaccagaaaatta
ggaataagacttttgattcctgaagaaaaaattgctacgtttgatatttctaacatcgtt
ttcgaaattgctccgaaaatcaatgctgcaggaagaatttctcacggaaaagccgcagta
gaattgatgatttcagacaatttgaaacacgctcatcaaattgtagatgatatcttaaac
ctcaacgattccagacgagaattagacgctaatactactcaatctgcctttaaccaagtt
atcgagacccagcaagaaaataatttcaccactgtggtttatcacaatgaatggaacaaa
ggcgttatcgggattgtagcttctagactgacggaagtgtactacaaaccgactttggtt
ttcaccgatggaaacaatggcgaaatggtagcttctgcaagaagcgtttcagattttgat
gtgcacgaagccttagaagcgtgtagtgaatatttcttaaaattcggaggacatcaagct
gcggctggactttcgatggagaaagacaaatttgaagctttcaaagaaaaatttgaaaaa
gtagtggccgaaaaaattcaagaacaccaaaaattcccttccattacgatagattctgtt
attgaaatagaagatttaaaccgtgatttctttaattttcacagaaaattatcacctttt
ggtccacacaatatgaagcctgttttagaactgagaaaccaaaaagtttctggttacgta
aaacaaatgggtaaagacggaaatcacctaaaattctacattcatcaaccagtttctggc
agaaatatagaatgtattggctttaaattaggtcaatatatggatgatttcaaaactaaa
aatttcgacattgcttttaccgtagaagaaaatcactggaaaggaaatgtaacctattat
ttgaatattcgtgatgtgaagtttcattaa
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