Cloacibacterium normanense: EB819_02515
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Entry
EB819_02515 CDS
T05730
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cnr
Cloacibacterium normanense
Pathway
cnr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EB819_02515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnr03019
]
EB819_02515
03009 Ribosome biogenesis [BR:
cnr03009
]
EB819_02515
Enzymes [BR:
cnr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EB819_02515
Messenger RNA biogenesis [BR:
cnr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EB819_02515
Ribosome biogenesis [BR:
cnr03009
]
Prokaryotic type
rRNA helicases
EB819_02515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
EutC
Motif
Other DBs
NCBI-ProteinID:
AZI68806
UniProt:
A0A1E5UFL5
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All DBs
Position
complement(514896..516608)
Genome browser
AA seq
570 aa
AA seq
DB search
MNLFTESNLSPDLLKAIGELGYEQPTEIQKQTIPFILSDTRDLIALAATGTGKTAAFSLP
ILDMIDDASRKIQLLVLCPTRELCLQITKDIKNYTKYLPNLKTTAVYGGSSITDQIRSLR
EKPQIIVGTPGRVIDLIGRKALDFSEIHWLVLDEADEMLSMGFKDDLETILNETPSEKQT
LLFSATMSKEVERITKNYLTNPHRISVGSINEVKKNIKHEYYVVGYRQKKEALKRLLDAN
PNQYSIIFCRTRMETQEVADFLMQNAYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVNSLTHVIHYSLPDDPEVFVHRSGRTGRAGKDGISMSLIKPEESRKLKQIKLS
TKIEIVEKKIPTGEEIIKAQVEGVFEKLFTEHEELFTFDDSLIPDLSAFSKEELVHQLLQ
LQLRDLALFYKDKQDLADQKLSNDRDDRGSRRDRDRDRGRGRDRDRGDRSERRSDRDGGR
ERGGKPKRRNENMTRFFFNLGKRDNLKKMDMLEIINKATAKSKKRADIGDIEILEKFSFF
EVEKSFKDEVLKGLQTQKFKGKDMRAEVAN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttacggaatccaatttaagtcctgatttattgaaggcaattggcgaactc
ggctacgaacagccgacagaaatccagaaacagactattccttttatcctttcggatact
cgcgatctcatcgcacttgcggcaacaggaacaggcaaaacagcagcattttcgcttccg
attctggatatgatagacgacgcaagtcgtaaaatccagttattagtgctttgccctact
cgtgaactttgccttcagattaccaaagacattaaaaactatacaaaataccttcctaac
ctaaaaactaccgcagtttatggaggaagcagtattacagaccaaattcgttcacttcgt
gagaaaccacagattattgtaggaactccaggacgtgtaattgatttaattggtagaaaa
gctttagatttttcagaaatccattggctcgttttagacgaagctgatgaaatgctttct
atgggtttcaaagatgatttggaaactattttaaacgaaactccttctgaaaaacaaacg
ttacttttctctgctacgatgagcaaagaggtagaacgtattaccaaaaattatttgacc
aatccacacagaatttctgtaggttctattaatgaagttaagaaaaacattaagcacgaa
tattatgtggtaggctacagacagaaaaaagaagctctaaaaagattattggatgctaat
cctaatcaatattctattattttctgtagaacaagaatggaaactcaggaagttgcagat
ttcttgatgcaaaatgcttatgcagcagatgcacttcacggtgatttatctcaagcgcag
agagatacggtaatgaaaaaattccgtttgaaaaacattgacattttggttgcaacagac
gtagcagctagaggtttagatgtaaattctcttacgcacgttattcactactcgcttcca
gatgatccagaagttttcgtacatagaagtggtagaactggtagagctggtaaagatggt
atttctatgtctttaattaaacctgaagaatctagaaaactaaaacaaattaaactttct
acaaaaattgaaattgtagagaagaaaattccaacgggtgaagagatcatcaaagctcaa
gtagaaggtgtttttgaaaagttatttacagaacacgaagagcttttcacttttgacgac
agccttatccctgatttatctgcattctctaaagaagaattggttcaccagttgcttcaa
cttcagctaagagatttagcgcttttctataaagacaaacaagatttggcagaccaaaaa
ttatctaatgacagagatgacagaggcagtagaagagatcgtgaccgtgatagaggaaga
ggaagagacagagacagaggagacagaagcgaaagacgttcggacagagacggaggaaga
gaaagaggtggaaaaccaaaacgcagaaacgaaaacatgaccagatttttctttaacctt
ggtaaaagagataatctaaagaaaatggacatgctagaaatcatcaataaagctacggct
aaatctaaaaaacgtgcagacataggtgatatagaaattctagaaaaattctcattcttc
gaagttgaaaaatcttttaaagacgaagttctaaaaggtttacaaacacagaaattcaaa
ggaaaagatatgcgcgccgaagtggccaactaa
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