Cloacibacterium normanense: EB819_04615
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Entry
EB819_04615 CDS
T05730
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cnr
Cloacibacterium normanense
Pathway
cnr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EB819_04615 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnr03019
]
EB819_04615 (recQ)
03400 DNA repair and recombination proteins [BR:
cnr03400
]
EB819_04615 (recQ)
Enzymes [BR:
cnr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EB819_04615 (recQ)
Messenger RNA biogenesis [BR:
cnr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EB819_04615 (recQ)
DNA repair and recombination proteins [BR:
cnr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EB819_04615 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ-1-like_HTH
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Motif
Other DBs
NCBI-ProteinID:
AZI69201
UniProt:
A0A1E5UEU2
LinkDB
All DBs
Position
1005734..1007935
Genome browser
AA seq
733 aa
AA seq
DB search
MKTKHEDLTSALKKYFGFSTFKGRQEEIISTLLSGNDVFVLMPTGGGKSLCYQLPALLSE
GTAIVVSPLIALMKNQVDAINGISAEEGVGHVLNSSLNKTQTKQVFDDIKSGKTKLLYVA
PESLVKEEYLNFLKEIKISFVAIDEAHCISEWGHDFRPEYRNLKLIIDKIAKVPVIALTA
TATPKVQDDIQKTLGMNNALVFKDSFNRPNLYYEIRPKVNVDREIVKFINQHKGKSGIVY
CLSRRKVEEFSQLLQVNGINALPYHAGLDQKTRVANQDKFLMEEADVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYLLYYFGEEFDPINGDGAKMDDNSVNPPKLKDASKDLKKV
LEIVKDLEEKFRTKDLISIISGKESATTKAYKLENSKHFGIGKSENDNYWKSIIRQATVQ
GYLTKDIETYGVLKLSEKAKNFLSGKETPEFMIAEDREYDLAAIADAEQVQVQAGGGLDQ
NLFAQLKELRKKVAKKHGIPPYTVFMDPSLEDMTVQYPITVDEIAKVYGVGEGKAKKYGK
EFAEFIAKYVEDNNIERTQDMVLKTVANKSSHKVFIIQNTDKKIDLEDIAKAKHLSMDDL
LSEMESIVYQGTKLNIDYYIEENFDEDIVDDFMDFMKESESDSMKVILSEFGDDLSDEEV
RMLRIKFISDVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaagactaaacatgaagatttaacaagtgcactaaaaaaatatttcggattttctact
tttaaaggaagacaagaagaaattatttccaccttattgagtggtaatgatgttttcgta
ttaatgccaactggcggtggtaaatcgttgtgttatcaacttcctgcacttctttcagaa
ggaactgctattgtagtttctccgctgattgctttaatgaaaaaccaagtagatgccatt
aatggtatctctgccgaggaaggagtaggtcatgtcctgaattcttctctcaataaaacc
caaacaaaacaagtttttgatgacatcaaaagcggcaaaaccaagttgctctatgtagct
ccagaaagtttagtaaaagaagagtaccttaattttttaaaagaaataaaaatttctttc
gtggcgatagacgaagcgcactgtatttcggaatggggacatgatttccgaccagaatac
agaaatctcaaattaattattgataaaattgcaaaagttcctgtaattgcattgactgca
actgctacaccaaaagttcaggatgatattcagaaaactctaggaatgaacaatgcattg
gtttttaaagatagttttaatagacctaatctttactacgaaattcgtcctaaagtaaat
gtagacagagaaatcgtaaaatttatcaatcaacacaaaggcaaatcaggaattgtttat
tgtctcagccgaagaaaagtagaggaattctctcagttattgcaggtaaatggaatcaat
gcattgccatatcacgctggtcttgaccaaaaaaccagagtagctaatcaagataaattc
ttgatggaagaagcagatgtaattgttgctaccattgctttcggaatgggaattgacaag
ccagatgtaagatttgtcattcattatgatattccaaaatcgctagaaagttattatcaa
gaaacaggtagagctggtagagatggaggagaaggtcattgccttgctttttatgatcca
aaagacattgaaaaattagaaaaattcttagctcaaaaaccagtttctgaacgtgaaatc
ggacttcaacttttgaatgaagtagtaggttatgccgaaacttctatgagcagaagacaa
tatttactctattatttcggagaagaatttgacccaatcaatggtgatggtgctaaaatg
gatgataattctgtaaacccaccaaaactgaaagatgcttctaaagatttgaaaaaagtc
ttggaaatcgtaaaagatttggaagaaaaattcagaactaaagatttaatttcgattatt
tcgggaaaagaatctgccactaccaaagcttacaaattagagaattctaaacatttcggg
attgggaaatctgaaaatgacaattattggaaatccatcatcagacaagctactgtacaa
ggttatttgactaaagatatagaaacttacggcgttctgaaactttctgagaaagctaaa
aatttcctttctggaaaagaaactccagaatttatgattgccgaagatagagaatatgat
ttggcagcgatagcagatgcagagcaagttcaagtacaagctggaggtggtcttgaccaa
aatcttttcgctcagttaaaagaattgagaaaaaaagtagccaaaaaacatggcattcct
ccttatacggtttttatggatcctagtttagaagatatgactgtacaatatccaattacg
gtagacgaaattgcaaaagtttacggagttggtgaaggaaaagctaaaaaatacggaaaa
gaatttgcagaattcatcgcgaaatatgtagaagataacaacattgagagaactcaagac
atggtactaaaaacagttgccaataagtcttctcataaggtttttatcatccaaaatacc
gacaaaaaaatagatttagaagacattgccaaagcgaaacatctgagcatggatgatttg
ctttctgaaatggaatctattgtttatcaagggactaaactcaatatagattattacata
gaagaaaattttgacgaagatattgtagatgattttatggattttatgaaagaatctgaa
agtgattctatgaaagttattttatcagaatttggcgatgatttgtctgatgaagaagtg
agaatgcttcgaattaagtttatttctgatgtagcaaattaa
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