Cloacibacterium normanense: EB819_09225
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Entry
EB819_09225 CDS
T05730
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cnr
Cloacibacterium normanense
Brite
KEGG Orthology (KO) [BR:
cnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnr03009
]
EB819_09225 (rlmD)
Enzymes [BR:
cnr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EB819_09225 (rlmD)
Ribosome biogenesis [BR:
cnr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EB819_09225 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
TRM5-TYW2_MTfase
RrnaAD
N6_N4_Mtase
Methyltransf_11
MTS
Cons_hypoth95
Methyltransf_15
PCMT
Methyltransf_4
FtsJ
2-ph_phosp
PabTrmU54_TRAM_dom
NpmA
PrmA
Motif
Other DBs
NCBI-ProteinID:
AZI70046
UniProt:
A0A1E5UBA6
LinkDB
All DBs
Position
complement(2021168..2022577)
Genome browser
AA seq
469 aa
AA seq
DB search
MSKKKKNIILENIKLITAGAKGVAVGKTEEGKTVLVSGAVPGDVVNARVKKSKSKYFEAE
AVEILEKSPYRVEPKCIHFGVCGGCKWQNLSYQKQLDFKQEEVYNNIKRIGGIENFETLP
ILGSEQEYFYRNKMEFSFSNARWLTQYEISSEENFGNKDALGFHIPGMWSKILDLQECFL
QEAPSNDLRLAVRNYAINKGLDFFDVRNQEGFLRTLMLRQNSQGEWMVLFQLYREEKENR
EQLFDYILEKFPQIKTLVYAINPKQNDSIYDLDVQTYFGEGFIYEEMDGLKFKIGPKSFF
QTNYKQALNLYRKTLEFAEISENDVVYDLYTGTGTIAQYIAKKAKYVIGIESVQEAIDAA
KEHAKLNGLENCEFYCGDMKDVFTEEFLANHPKPNVLITDPPRDGMHQKVVEQILKLAPP
KIVYVSCNSATQARDLALMKEHYDVVKILPVDMFPQTHHVENIALLIKK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaaaagaaaaacattattttagaaaatattaaattaattactgctggtgca
aaaggtgtagccgtaggaaaaactgaggaagggaaaacagttttagtttctggtgcggtt
ccgggtgatgtagttaatgccagagtgaaaaaatctaaatctaaatacttcgaagcagaa
gcagtagaaattttagaaaaatcaccttacagagtagagccgaaatgtattcatttcgga
gtttgcggtggttgcaaatggcagaacctttcttaccaaaaacaactcgatttcaagcaa
gaagaagtttataacaatatcaaacgaatcggtggaatcgaaaattttgaaaccttacct
attctcggttcagagcaagaatatttctacagaaataaaatggagttttctttttctaac
gctcgttggcttactcaatacgaaatcagttccgaagaaaatttcgggaataaagatgct
ttaggattccatattccaggaatgtggagcaaaattttagatttacaagaatgcttcctt
caagaagcgccatctaatgatttaagattagccgtaagaaattatgccatcaataaaggg
ttagatttttttgatgtaagaaatcaagaaggctttttgagaactttaatgcttcgtcaa
aactctcaaggagaatggatggttttattccaattgtacagagaagagaaggagaacaga
gaacaattattcgattatattttagagaaatttccgcaaatcaaaacattggtttatgcc
atcaatccgaaacagaatgattctatttatgatttagatgtacagacgtatttcggcgaa
ggttttatttatgaagaaatggatgggctgaaatttaaaatcggaccgaaatctttcttc
caaaccaattataaacaagcgctgaatttgtatagaaaaacactagaatttgcagaaatt
tctgaaaatgatgtggtttatgatttatatacaggaacaggaacgattgcgcaatatatt
gccaaaaaagcaaaatacgtaatcggaatagaatcggtgcaagaagcgattgatgctgca
aaagaacatgctaaactcaatggtttagagaattgcgagttttattgtggcgatatgaaa
gacgttttcacagaagagtttttagccaatcatccaaaaccaaatgttttgattaccgat
ccacctagagacggaatgcaccaaaaagtggtagaacaaattctgaaattagcaccgcca
aaaattgtctatgttagctgtaattctgctactcaagctagagatttagcactgatgaag
gaacattatgatgtggtgaagattctgccagtagatatgtttccgcagacacatcacgta
gaaaatatagcgctattaataaaaaaataa
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