Contarinia nasturtii (swede midge): 116336573
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Entry
116336573 CDS
T08003
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116336573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116336573
03021 Transcription machinery [BR:
cns03021
]
116336573
03036 Chromosome and associated proteins [BR:
cns03036
]
116336573
Transcription factors [BR:
cns03000
]
Eukaryotic type
Helix-turn-helix
ARID
116336573
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116336573
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
116336573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
116336573
NCBI-ProteinID:
XP_031616349
LinkDB
All DBs
Position
Unknown
AA seq
1936 aa
AA seq
DB search
MTTTDTTAGAPLAISNTVNDDSVSSASKTGSIKKHYVQHFPPPPATPTTNNRTNAVVDER
DKASFYKDLYHFHEVKGTPIPRLPCVNGHEIDLHKFYSLVCSRGGWAKINYRNEWEDLVP
EFDLPSKCVNASVALKQIYMRYLDRYEKIHFLGEDNDRIIDETDEDNRHKKWNNKHFNDV
PMKYNYLQHNVAENMRTTHKLSTDLYKSSEYERLLMSLMSPLPNEQDFAVNVCTLMANES
RHTLKVERCPKLLDALMGHAGVYSHHSMRELFFEFYSNVRKHSLQSFWNDCLHDKPDILE
LTYEDYFEVDENVSGNVISGRPPVRLRNNDNETFEDGLNTRSNELKEFSSMDFLNLKRGL
GTHDYIGQRVHQVSTICRNLSFFDENLPTIVKNRTFVRFLVMCSNIRWGNLHQMGLDTLG
NIAIELDLCDPNNDTLTKCLLTTISEGLESQDRGVIISCLEILYKLCQKGTNEDHLHKYL
DKRVYRQICMYLSLNDIMLLLYTLECLFALSSMGEKACFAIVQINGVIDTLVSLVSVEAQ
SYGPDGCILMRVVETVPTPLTSQQQQQGHHSHGHFQQTTQISSQPVMTQLQSAPSAVHVT
ERNQIETRIEVKNEPPRIEKPIPAPIIQQHQSHDIAINQNQPILVPQLQLQQQQQQQQQQ
HHQITQHQTQPSLPSPPPIIVQSTIPTMPTVSQNPIVVPVPKLQQQMQVQIKSEIKMNQV
CVQNATEQFYPVSCAPTMVKIQTSASPTITTAAPSFLSSSNVVYSEQQTTTIHTSSAQNP
NSLKLAQDQENEQFALAWLRATFEPASTIASRIEQQDLYKMYLTACSKIGRTGVVSQHHF
PRCVQNVFGNTVGPNQIKIKQNTITSYFYEGIRIRAQPLAVVHKGTILQAAVTTTTIKAS
DNAVNKDQPTIIKTPIIQNQNKTNTNQMQMNASSAPILQQVLSTNQTEHIHMTQNRTQIR
QTQNSIIVSSSPSIVTSSSSGCGATTQSSLIKAILANKVTTVDGTTVIGTPNITTNLVPS
INPSIITATSNMNVHQVAQRQHLQKQREAQLAAAAQSSINVTNMNNSYVIKTPTGTVTPN
KVAGNTLIPATIIEKKAEAMLEAYKSNWDPVPPLAPLSSNSIRQTSIIASIPVPTVSPSK
VDDDSNSTSQSANSSIYGTNPTTPSCQDETETFAGFDGLLVPGNIKIEEDGKDQQHLIAA
GKHSQVVTANKMLADLLERKSSDPPFNVSGDISNKRKCDTNANPTNDEPPTKRSNYLEND
NVSNDKKNATKSSSNAVNSYLSTFAASLLEDEDMELEETPSTSQLQSQPPSLTQTQQQQQ
QHQQQQQQQQQSQQQVIPASVMDQQSKSMISVPMQRQIIVSPNNARQQMIIAPPTSNQQM
GQATATIKTGDGAFQTVPVILQHGNNQVGNIQIQKQLGGIGQQIIQPVPQTQYMLATNQQ
GQTYLVAQQQPPPVNQILLTQTSQQQGGAPTKTIIILQQQTPTAVNTSSTPQKMIMTTQQ
GQQMIVTQVPRQHHVIVNQHSGNAGANVIQSNPQMSSTNAIINQVTSTPISSSSQPQIVQ
HMRAINSVSHAPVSMSPNVITTSEKKKVFVTGSGNIEVTQVSQPISQIVAPNLTPNVTSN
VIQKPVQQHQQHQQHQQHQQHQQHQHQIVSAVPTQSSIPAPTITNQLPLSQQQQSNMTPS
KSVAPSQAPPLNVQQPIKSEPSNQISVKIEDEIDVNWLYVCDWRGCQRRKFRSANEVYLH
ACAEHCPDNIDPNADIYCQWGPGPNLCDNLPRKRFSLMTHINDRHITLDSFKTAVQRRIA
NGPQTSVTQPVTIIKKPMPPNTNDNAGGTASPTLSTSSTSSLSAGSSAAMQAIKRHSIDL
INPKELMFQDENEGPVTKSIRLTASLILRNLVNYTTTAKRCLRYYEPHLSSVALSNVESS
RTIAQVLYEMNETRPY
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atgactacgacagatacgacagctggtgcaccactagccatctcaaatacagtgaacgac
gattcagtgagcagtgcttcgaaaaccggttcaataaaaaagcattatgtacaacatttt
ccgccaccaccagcaacaccaacaacgaacaatcgaaccaatgccgttgtggatgaacgc
gataaagctagcttttataaagatttataccattttcatgaagtcaaaggaacaccaatt
ccacgtctgccgtgtgtgaatggccacgaaattgatctacataaattttattcattggta
tgcagtcgcggtggatgggccaagataaattatcgcaatgaatgggaggatttagtacct
gaattcgatctgccaagcaaatgtgtgaatgcatcggtggcattgaagcaaatttatatg
cgatatttggatcgttatgaaaaaattcattttcttggcgaagataatgatcgaatcatt
gacgaaacggacgaagataatcgccataaaaaatggaataataaacatttcaacgatgtt
ccaatgaaatataattatttacagcataatgttgccgaaaatatgcgtaccacacataaa
ctatcgaccgatttatataaatcatcggaatatgaacgattgttaatgtcattaatgtca
ccgttaccaaatgaacaagatttcgctgtaaatgtatgcacattaatggccaatgaaagt
cgacacacgctcaaagttgaacgatgtccaaaactactcgatgcacttatgggacatgct
ggcgtttattcgcatcattcgatgcgagagttattctttgaattttattcgaatgttcga
aagcattcgttgcaatcgttctggaatgattgtttgcatgataaaccggatattttggaa
ttaacttacgaagattatttcgaagtggatgaaaatgtatcgggcaatgtcatatcggga
cggccaccagttcgattacgaaacaatgataatgaaacatttgaagacggcttaaatacg
cgatcgaatgaattgaaagaattttcatcgatggactttttgaatttaaaacgtggactt
ggtacgcatgattatatcggtcaacgtgtgcatcaagtgtcaacgatttgccgaaattta
tcattcttcgacgaaaatctaccgacgattgtgaagaatcgaacatttgttcgatttttg
gtgatgtgctcaaatattcgttggggtaatttacatcaaatgggcttagatacgctgggt
aacattgccatcgaattggacctgtgcgatccaaacaatgacacattaacaaagtgttta
ttaacaacgatttccgaagggttggaaagtcaggatcgtggtgtgatcataagttgcttg
gaaattttatataaattgtgtcaaaaaggaacaaatgaagatcatttacataagtatctg
gataagcgtgtgtatcgacaaatttgcatgtatttatcgctgaacgatattatgttgttg
ttgtatacgttggaatgtttgtttgcattgtcatcgatgggcgaaaaagcatgttttgct
atcgttcaaataaatggcgtcatcgatacattagtgtcacttgtttcggttgaagcacaa
agttatggacctgatggatgcattttaatgcgtgtcgttgaaacagtgcccacaccattg
acatctcaacaacaacagcaaggccatcattcgcatggacattttcaacaaacaacgcaa
atatcatcgcaaccagtcatgacacaacttcaatcggcaccatcagctgttcatgtaacc
gaacgcaatcaaatcgaaacgagaattgaagtgaagaatgaaccacctcgaatagagaaa
ccaatacctgcaccaataatacagcaacatcaatcacatgacattgctattaatcaaaat
caaccaatattggtaccacagcttcagctgcagcaacagcagcagcagcagcagcaacaa
catcatcaaataacgcaacatcaaacgcaaccatcattgccatctccacctccaataatt
gtacaatcaacaattccgacaatgccaacagtatcacagaatccaatcgttgtaccggtg
ccaaaattgcaacaacaaatgcaagtccaaataaaatccgaaatcaaaatgaaccaagta
tgtgttcaaaatgcaactgaacaattttatcccgtatcatgtgcaccgacaatggtaaaa
atccaaacaagtgcatcgccaacaataacaactgccgcaccatcatttctcagcagttca
aatgttgtgtactccgaacaacaaacgacaaccatacatacgtcatccgcacaaaatccg
aattcattgaaacttgcacaagatcaagaaaacgaacaatttgcattggcctggttgcga
gccacatttgaaccggccagtacaattgcatcacgtattgaacaacaagatttatataaa
atgtacttaacagcatgctcgaaaatcggacgaaccggtgttgtgtcacagcatcatttt
ccacgttgtgttcaaaatgtgtttggcaatacggtcggaccaaatcaaattaaaattaaa
caaaacacaatcacatcatatttctacgaaggaattcgtattcgagcccaaccattggct
gtggttcacaaaggaaccattttgcaagcggctgtcaccacaacgacaataaaagcgtcc
gataatgctgtgaataaagatcaaccaacgatcatcaaaacaccaatcattcagaatcaa
aataaaaccaatacaaatcaaatgcaaatgaacgcatcgtcggcgccaattctacaacaa
gttttgagcaccaatcaaaccgaacacattcacatgacacaaaatcgtacgcaaatacga
caaacacaaaattcaataattgtatcatcatcaccatcgatcgttacgtcgtcatcaagc
ggctgcggcgccaccacccaatcatcattgatcaaagcaattttagccaataaggtaaca
actgttgatggcaccaccgttattggcacgccgaacataacaacgaacttagtaccatcg
ataaatcctagtattattaccgctactagcaatatgaatgtgcatcaggtagcgcaacgg
caacatttgcaaaagcaaagagaagctcaattagcagcagcggctcaatcatcgataaat
gtaacaaatatgaacaatagttatgttataaaaacgccaactggaacggtaacgccaaac
aaagtcgccggtaatacactgataccagcaaccataatcgaaaagaaagctgaagctatg
ttagaagcatacaaatcaaattgggatccagttccaccattggcaccattgagcagtaat
agcatacgacaaacaagtataatcgcctcaatacctgtaccaacggtcagcccatcaaaa
gttgatgacgattcaaattcgaccagccaatcagccaactctagtatatatggtacaaat
ccaacgacaccaagttgtcaagatgaaacggaaacgtttgccggtttcgatggtttattg
gtgccgggcaatataaaaatcgaagaagatggtaaagatcaacaacatctcattgctgct
ggcaagcattctcaagttgttacggcaaataaaatgcttgccgatttacttgaacgaaaa
tcgtctgatccaccatttaatgtttcaggcgatataagcaataaaagaaaatgcgataca
aatgcaaatccaacaaacgatgaaccgccaaccaaacgatcaaattacctagagaatgac
aatgtttcaaatgataaaaagaatgcaacgaaatcatcatcgaacgccgttaattcgtat
ctgtcaacatttgccgcatcattgctggaagacgaagatatggagttggaggaaacacca
tcaacgtcacaattgcaatcgcaaccaccatcgttgacacaaacccaacaacaacagcaa
cagcaccagcaacaacagcaacagcaacaacaatcacagcaacaggttattccagcttcg
gttatggaccaacaatcaaaatcaatgatcagtgtgccaatgcaacgacaaatcatagtc
tcacccaacaatgctcgtcagcaaatgataattgcaccaccaacatcaaatcaacaaatg
ggacaagcaacagctacaattaaaactggagatggtgcattccaaactgtaccggtcatc
ttacaacacggcaataatcaagtgggtaacattcaaatccaaaagcaactcggtggcatt
ggacaacaaatcattcaaccagttccacaaacgcagtatatgctggcgaccaatcaacaa
ggtcaaacatatttggtggcacaacaacagccgccgccagtcaatcaaattcttttgaca
caaacatcacaacaacaaggtggcgcaccaacaaaaacaatcatcatccttcaacagcaa
acaccaacagccgtaaatacatcgtcaactccgcagaaaatgataatgaccacgcaacaa
ggacaacaaatgattgtgacgcaagtaccacgacagcatcatgtcattgtcaatcaacat
tctggaaatgccggtgcaaatgtcatacagtctaatccgcaaatgtcgtcgacaaatgcg
attattaatcaagtgacaagtacaccaattagttcaagttcacaaccgcaaattgtacaa
cacatgagagctattaattcggtgtctcatgcaccagtttcgatgtcgccgaatgtaata
acaacaagtgaaaagaaaaaagtatttgtaacgggtagcggtaacattgaggtgactcaa
gtatctcaaccaatttcacaaattgtagcaccaaatctaacgccaaatgtaacatcgaac
gtgatacagaagccagttcaacaacatcagcaacatcaacagcatcaacaacatcaacag
catcaacaacatcaacatcaaattgtaagtgcggtgccaactcaatcatcgatacctgca
cccacaataacgaatcaattaccactatcgcagcaacaacaatcgaatatgacaccatca
aagtcagttgctccttcgcaagcgccaccgctcaatgttcaacagccaatcaagtccgag
ccatccaatcaaatatccgtgaaaatcgaagatgaaatcgatgttaattggttgtatgtg
tgcgattggcgtggatgtcaacgaagaaaattccgttcagcgaacgaagtgtatttgcat
gcatgtgccgaacattgtccagataatatcgatccaaatgccgatatctattgtcaatgg
ggccctggaccaaatctctgcgataatttgccacgtaaacgattttcactaatgacacac
atcaatgatcgtcatataacattggattcatttaaaacggccgtacaacgacgcatcgca
aatggaccacaaacatctgtaactcaacccgtaactataattaaaaaaccaatgccacca
aataccaatgataatgctggtggcacggcatcaccaacactgtccacgtcatcaacaagt
tcattatcagccggaagtagcgcagccatgcaggccatcaaacgacattcaatagacctc
atcaatccaaaagagcttatgtttcaggatgaaaacgagggtccggtgacaaaaagtatc
agattgacagcttcattaattctacgaaatcttgtgaattatacaacaacagcaaaacga
tgtttacggtattacgagccgcatttgtctagcgtagcattaagcaatgtggaatcaagc
cggactatcgcacaagttttgtacgaaatgaacgaaacacggccgtattga
DBGET
integrated database retrieval system
