Contarinia nasturtii (swede midge): 116336585
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Entry
116336585 CDS
T08003
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116336585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116336585
Spliceosome [BR:
cns03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116336585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
116336585
NCBI-ProteinID:
XP_031616373
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All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSHLTQRDIESLRPELERIVAEKVSDNHSDVVSTLEKCLYSGYDRKRATEKLSHWIDSKK
ASRIYDKLEDLIERRKTVSKLNKRGNDDNDEKVIKKIRTGYEENEVSVPKPTVAPPIVVP
PPSWQTESKSLTSQQINMMMANAQREIEERKKALSTLKSKDPANQEDVERAKKIAMLQAQ
IKAKLSGIGMSAIIPQVQEKPKPLILDEQGRTVDNSGRAISIPTLAPTLKANIRAKKKET
FSKAATANDRQQEDQSQTFFDDRITAKPAIRSKRSLRFHEPGKFQQMAEKLRMKTQLEKL
QNEISQIARKTGISSATKLALIAPKQDSHAEDVPQMEWWDSVILANDLKTMHGDNIAIRE
LSITNLIEHPTQMKPPNEPIKPVYLPVFLTKAEQKKLRRQNRREAWKEEQEKIRLGLIPP
PEPKLRIANLMRALGNEAVQDPTKIESHVREQMAKRQKAHEDANNARKLTAEQKREKKIR
KVKEDVSCGVSVSVYRIRELNTFHSKKYKVEQNAKQLLMTGVTVLFRDCCVVVVEGGPKQ
QKKYRRLMLNRIKWDEDMVNNADGNEVPNSCVLVWEGTSARRHFGEMKFKLFPMEKMARE
FFQRHQVEQYWDLAYSGAVLEAL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatttgacgcaacgtgatattgaatcgttgcgacctgaattggaacgaatcgtt
gccgaaaaagtgtccgataatcattctgatgttgtgtcaacgctggaaaaatgtttatac
agtggttacgatcgaaagcgagctaccgaaaaactaagtcattggattgatagcaagaaa
gcaagtcgaatctatgataaattggaggatttaattgaacgacgaaaaaccgtatcgaaa
ttaaataaacgcggtaatgatgataacgatgaaaaagttatcaaaaaaattcggaccggc
tacgaagagaatgaggtgtccgtaccaaaaccaacggttgcaccgccaattgtggtaccg
ccaccgtcatggcaaaccgaatcaaaaagcctaacatcacaacaaatcaacatgatgatg
gccaatgcacaacgtgaaattgaagagcgtaaaaaggcgttgagtacattgaaatcaaaa
gatccggcaaatcaagaggatgtggaacgcgccaaaaagattgccatgctacaggcacaa
atcaaagcgaaattatcgggcatcggaatgagtgcgataataccgcaagtgcaagagaaa
ccgaaaccattgattcttgatgaacaagggagaacggttgacaatagcggacgagcaatt
agcataccaacattggcaccaacgcttaaggcaaacattcgagccaagaaaaaggaaaca
tttagcaaagcggcaacggcaaatgaccggcaacaagaggatcaatcgcaaacattcttt
gacgatcgaatcacggcaaagccagccatacgatcaaagcgttcattacgctttcatgaa
cctggtaaatttcaacagatggccgaaaaattacgcatgaaaacacaattggagaaatta
caaaatgaaatatcgcaaattgcacgcaagactggaattagttcggccacaaaattagca
ttgattgcaccaaaacaagattcacatgccgaagatgtgccacagatggaatggtgggac
tcagtcatattggccaacgatcttaagaccatgcacggtgataatattgctattagagag
ttatccataaccaatttaattgaacatccaacacaaatgaaaccgccgaatgaaccaatt
aagccagtctatttgccggtatttctaacaaaagcagagcagaaaaaattacgacggcaa
aatcgacgggaagcatggaaagaggaacaagaaaagattcgattgggtttgataccaccg
ccggaaccaaaattacgtatagccaatttaatgcgtgctttgggcaatgaagccgttcaa
gatccgaccaaaattgaatcgcatgtgcgcgaacaaatggcaaaacgacaaaaagcccat
gaagatgcaaacaatgcgagaaaattgacagccgaacagaaacgtgaaaagaaaatccgt
aaagtaaaggaggatgtatcgtgcggagtatcagtgtctgtgtatcgaattcgtgagctg
aacacattccacagtaaaaaatacaaagtcgaacaaaatgcaaagcaattattgatgacc
ggtgttacggtgctgtttcgtgattgttgcgttgttgttgttgaaggtggaccaaagcaa
cagaagaagtatcgacgtcttatgttgaatcgcatcaaatgggatgaggatatggtaaac
aatgctgatggaaatgaagtgccaaattcatgcgttcttgtttgggaaggaacgagcgca
cgacgtcattttggtgaaatgaaattcaaactatttccaatggaaaaaatggcacgcgaa
ttctttcaaaggcatcaagttgaacagtattgggatctcgcctattctggagctgtactc
gaagcattgtaa
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