Contarinia nasturtii (swede midge): 116336666
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Entry
116336666 CDS
T08003
Name
(RefSeq) paired box protein Pax-6-like isoform X1
KO
K08031
paired box protein 6
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116336666
Transcription factors [BR:
cns03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116336666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
HTH_SB
DUF6115
HTH_28
Motif
Other DBs
NCBI-GeneID:
116336666
NCBI-ProteinID:
XP_031616530
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MPHADRIMHSHGTSMSQSALFGCSSAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGA
RPCDISRILQVSNGCVSKILGRYYETGSIKPRAIGGSKPRVATSPVVQKIADYKRECPSI
FAWEIRDRLLSEAICNSDNIPSVSSINRVLRNLASQKEHQIQHQNESVYDKLRMFNGQSG
GWAWYPAAAAAATVTCSTANVPSQLSIPAPSSITNITASNLSTNLNGNQLIRDDSLKRDL
FSVDGINQTPSLANSHESTSDGNSDNGGNSSGDEDSQLRLRLKRKLQRNRTSFTNEQIDN
LEKEFERTHYPDVFARERLAEKIQLPEARIQVWFSNRRAKWRREEKLRTQRRSVDQQNNN
SVTGSVSTANSQSNGGLVSANGGNNNGTGNSGGGSSTGTSPSLIGSGSTPSRLPLNSGFN
SMYTSIPQTIGSITENYSPISTPLGSMASSCLQQRESYHPYMFHDPLSLSAQYAAHPSRH
HASCNPTVAHQQPHSQHGNYGTPGSVGSNSNLNSSSASTGLITAGISVPIQISTPSDIGG
SYWSRLQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgccacacgcagatcgaataatgcatagccatggaacgtcaatgagccaaagtgcatta
tttggctgttcctcggctggtcatagcggtatcaaccaattgggtggagtttatgtaaat
ggcagaccattgcccgactcaactcggcaaaagattgtcgaattggcacattctggtgcc
agaccttgtgatatttctcgcattcttcaggtttcaaatggatgtgttagtaaaatattg
ggaagatattatgaaactggttcaataaaaccacgtgcgataggcggctcaaaaccaaga
gtagccacctcaccagttgtacaaaaaattgccgattataaacgagaatgtcctagtata
tttgcgtgggaaatacgagatcgtctattatcggaagcgatctgtaatagtgacaatata
ccaagcgtttcatcaataaaccgagttctaagaaatttggcgtcacaaaaagagcatcaa
attcaacatcaaaatgaatcagtgtacgataaactgcggatgtttaacggtcagtcgggc
ggttgggcttggtatccggcggcagcggctgcagcaactgtcacttgtagcactgcaaat
gttccatcgcaattatcgattccggcgccatcaagcattacaaatattacggctagcaat
ttatcaaccaatttaaatggaaatcaattaattcgcgatgattcactcaaacgagattta
ttttcagtcgacggtataaatcaaacaccatcattggccaattcacatgaaagtacatcg
gacggtaattcagataatggtggaaattcatccggagatgaggacagtcaattacgtcta
cgtctcaaacgaaaattacaacgaaatcggacatcgtttaccaacgagcaaatcgataat
ttagaaaaagaatttgagcgcacacattatccggacgtgtttgcaagagagcgcttagca
gagaaaatccaactacccgaagcaagaattcaggtctggttttcaaatcgtcgagccaaa
tggcgtcgagaggagaaacttcgtacacaaagacgatctgtggaccagcagaacaacaac
agcgttaccggttcagtttcaacggcaaatagtcaaagcaatggcggtttagtgtcagcc
aatggtggcaataacaacggtacaggtaatagcggtggtggaagtagcacgggaacatct
ccatcattaattggaagcggatcgactccatcgcgtttgccattgaattcaggattcaac
tcaatgtatacatcaatacctcaaacaattggatcaataaccgaaaattatagtccaata
tctacgccattgggctcgatggcatcgtcatgcctgcaacaacgtgaaagttatcatcca
tacatgtttcatgatccattgtcattgagcgcacaatatgcagcgcatccgtcacgacat
catgcatcatgcaatccaacggtggctcatcaacaaccacattcgcaacacggaaactac
ggcaccccaggaagtgttggcagcaatagcaatttaaacagttcatcagcaagcacagga
ttaataacagctggtatttcagtacctattcaaatatcgactccatcagacatcggaggg
agctattggtctcgtttacagtga
DBGET
integrated database retrieval system
