Contarinia nasturtii (swede midge): 116336676
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Entry
116336676 CDS
T08003
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116336676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116336676
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
116336676
Prokaryotic type
Archaeal type
TFB
116336676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
116336676
NCBI-ProteinID:
XP_031616549
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MNSSLVDNKTVKIDKPLPQTEHKNVKMVREQQKSGCKTHGSDNLTEDHSTGDIICTKCAL
VVEERMLCVEAEWRNFADDSQAEKWAKSRTGDTENPLLSADYNLGTMIKSMDSNPKNMTS
FSGSVVQHYKRRSIDNALTHAFKEIDTMGDRISLPSSVLQRAKVLYQQLYRNIKLKGNIL
LVDTKTAACLYVACRMENCSRSKGEISAIYAVSKSALAGAVYRIYKILGLKISESNRSTE
MIDRYCGYLAYSKQELIKARKISKLIESRTPKTKAKLLPEVIAAASIFLASASIRGTLSG
REHVDMRIRLSDEIGEVVGIKGSQIVRTANSVKDDIELIDHDIFH
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatcgcttgtcgataataaaactgtaaaaatcgataaaccgttaccgcaaacc
gaacacaaaaatgtaaagatggttcgtgagcaacaaaaatccggttgtaaaacacacggc
agcgacaatttgacggaggatcacagtaccggtgacataatttgtacgaaatgtgcactt
gtggttgaagaacgaatgttgtgtgtagaagcggaatggcgaaattttgcggacgattca
caagcggaaaaatgggcaaaatctcgaacaggtgataccgaaaatccattgctcagtgct
gattacaatttaggcaccatgataaagtcaatggattcaaatccaaaaaacatgacatca
ttcagcggtagcgttgtacaacactacaaacgacgcagcattgataatgcattgacacat
gcattcaaagaaatcgatacaatgggcgatcgcattagcttaccatcgtcggtattgcaa
agggccaaagtgttgtaccaacaattgtacagaaacatcaaattaaaaggtaacatttta
ttggttgacaccaaaacggctgcttgtttgtatgtcgcgtgtcgtatggaaaattgttca
cgatcaaaaggtgaaatttcggccatttatgcggtcagcaaaagtgcattggccggtgcc
gtttatcgaatctataaaatacttggactaaaaatttcggaatcaaaccgaagcaccgaa
atgatcgatcgctattgcggatacttggcatattcgaaacaagagctgataaaagcccga
aaaatttccaaacttattgaatcacgcacaccaaagacaaaagcaaagcttctgcccgaa
gtgattgctgctgcatcaatcttcttggcttcagccagcattcgcggaacacttagcggt
cgtgaacatgtcgacatgcgaatacggctcagcgatgaaatcggtgaagttgttggcatc
aaaggcagtcaaatcgtccgaacagcaaactcagtgaaagatgacatcgagctcatcgat
catgatatttttcattga
DBGET
integrated database retrieval system
