Contarinia nasturtii (swede midge): 116336713
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Entry
116336713 CDS
T08003
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116336713
03036 Chromosome and associated proteins [BR:
cns03036
]
116336713
Transcription factors [BR:
cns03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116336713
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116336713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
KH_DUF2096_C
Motif
Other DBs
NCBI-GeneID:
116336713
NCBI-ProteinID:
XP_031616635
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MDSDSDDGATIRKKSHRNRRLESNITSSDDDSNASTVPVDFDALKNDTTSMIIDEAHDAD
VASATEEIDTGDPLLLPSNVEANQMPHDESNEIETNAEADCDVQNVIINNENEVENTVGR
IKLVPLTQLLTQNDEQQDKSKKPIELSSDNSSSSSSSSDELLSRLAKPKSSKKRFSKTRH
TKRNTNQSTEDESDNDSVSSQNHKSKAHKSKPNEKHDLYSSKIQLVKLPVNLEPLLKRYD
LSEIRDNDQTVIVSRVKTHRNEKKSNFKHALNDGSDDTSDNANKLKRNQTKKQKQNDDCM
PTTSKNSKNSNKEKRSQRIQKQKPLHYNISSDSDDTNNSNSNSNNNNDDDYVSDDDDYDD
DDINKKKMRKKNVPKSSNDVTDSTDASTNSEDDIEESEKSSESEPNIRSKRKRQITKKSS
EDDDDDDYPKPAKHKRRKRIKNNSSSSDDDGDKGTPKKHGRKNIRKMIRSADLEEETKEA
AKREAERKKRIEDRQKLYNEMYDNKLEEISELDKLVLDFDTDTKQELISVDKKLVKKLKP
HQGQGIKFMWDACFETLEKLNENHGGGCILAHCMGLGKTLQVVTLVHTLLTHSDKTNVEK
VLIICPVSTVLNWVNEFKIWLRHCSQNRNIEIFEISKYKQNAERAYRISEWHNDGGVLIL
GYDMFRNLSNESNRIPKKAKTIFQEGLIQPGPDLVVCDEGHLLKNAKTSLSKAVNRIRTL
RRIVLTGTPLQNNLNEYYCMVQFVKPNLLGKYNEYLNRFVNPITNGQYTDSTPFDIQMMK
RRSHILHKLLDGCVQRRDYSVLAPFLPPKQEYVLYIRMTKLQVDLYKYYMANRPAQNESG
KTRSSILFQDFQNLQRIWTHPRVLRYNSDRYEQMAQKKKFMASDDEEGSLKDFIDDDDDD
SDLDNSTSDSSDASSNDSSVQSVHSDKPSNSKKSQASNSVAVRRTRATAKDFEEEPIEPI
KEENPTEWWMPLCPEEELNNIEYSGKLMLLFSILAECEACGDKLLVFSQSLFSLDVIEHF
LAMIDENTQNPNPDAKLGSFTGSWTRGIDYFRLDGSTNIETRNANCISFNSEDNSQARLF
LISTRAGGLGINLVAANRVIIFDASWNPSHDIQSIFRIYRFGQKKPCYIYRFIALGTMEE
KIYERQVTKLAISKRVIDEHQIDRHYKENDLNELYNIENIDPEEERPQPKLPKDRLFAEQ
LHKYPDRIWKYHEHDSLLENKSEETLSKEEIEAAWKEFEEEKNRPAVTAQSFVGYPTYQR
AAGAGPVTSNNIFGFRTDILLQLLNIKARRTYPGNQNIAEIVPILLKHLYETMEKNDTSF
YQELLYIQQTEMAAPSQGSYLTPQGHIMPAYSGRGRPPLNPQHSTVHMQQQHLIQQAQNR
LMNMNGNPARQAPPRVSPQIIEID
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgatagcgatgatggtgcgactattagaaaaaaatcacatcgaaatcgacgc
cttgaaagtaatattacctcaagtgatgatgattccaatgcaagtaccgtaccagttgat
tttgatgcactcaaaaatgatacaacgtccatgatcattgacgaagctcatgatgctgat
gtagcatcagccaccgaagaaatagatacaggcgatccattgttactgccatcaaatgtt
gaagcaaatcaaatgccgcacgatgaatcaaatgagattgaaacaaatgcagaagcggat
tgtgatgttcaaaatgtgataatcaataatgaaaatgaagttgaaaacacagtaggccgc
atcaaattagtaccgttaacacagttgttaacacaaaacgatgaacagcaggataaatca
aaaaaaccaatcgagctgagctcagacaacagcagcagcagcagcagcagcagcgatgaa
ttgttgtcaagactcgcgaagccaaaaagttcaaagaaacgattttcaaaaactcgacat
accaaacgaaatacaaatcagagcaccgaagatgaatcggacaacgactcagtttcaagt
caaaatcacaaatccaaagcacataaatcaaaaccaaatgaaaaacatgatttgtattcg
tcaaaaattcaattagttaaattacccgtaaatttggaacccttgctcaaacgatacgat
cttagcgaaattcgtgacaacgatcaaacggttattgtgtcaagagttaaaacgcatcgt
aatgagaaaaaatcgaattttaaacacgcattgaatgatggaagcgacgataccagcgac
aacgccaataaattgaaaagaaatcaaacaaagaaacagaagcaaaacgatgattgtatg
ccaaccacttcgaagaactcgaagaactctaacaaagaaaagagatcgcaacgaattcaa
aaacaaaaaccattgcactacaatatttcatctgacagcgacgacaccaacaacagcaac
agcaacagcaacaacaacaacgacgacgattacgtttcagacgacgacgactacgacgac
gacgacatcaataagaaaaaaatgcggaaaaagaacgttccaaaatcgtcaaatgatgtc
accgactcgactgacgcctcgacaaattcagaggatgacatcgaggaaagtgagaagagc
agcgaaagtgaaccaaacattcgaagcaaaagaaaacgccaaattacaaaaaagagtagc
gaagatgacgatgacgacgattatccaaaacctgcaaagcacaaacgtcgcaagcgaatc
aaaaataattcgagcagtagcgatgatgacggggacaagggcacgccgaagaagcatggt
cgaaagaatattcgcaagatgatacgaagtgccgatttggaagaggaaacaaaagaggct
gccaaacgtgaggccgagcgtaaaaagcgtattgaagacagacagaaattgtataatgaa
atgtacgataacaaattggaagaaatcagtgagcttgataaattggtgttggattttgat
actgatacaaagcaagaattgatttcggttgataagaaattggtgaaaaaattaaaaccg
caccagggccaaggtatcaaattcatgtgggatgcttgttttgaaacgcttgaaaaactc
aatgagaaccatggcggtggctgtatccttgcccactgtatgggcttaggtaaaacatta
caagttgtaacattggtgcacacactattgacacacagtgataaaacgaacgttgaaaag
gtgttaatcatttgtcctgtgagcacagttctgaactgggtgaacgaatttaaaatttgg
ctacgtcactgcagtcaaaatcgaaacattgaaatttttgaaatttccaaatacaaacaa
aatgcagaacgtgcatatcgaatcagcgaatggcacaacgatggtggtgtacttattttg
gggtacgatatgtttcgaaatttatcgaacgaaagtaatcgaattccgaagaaagcaaaa
accatctttcaagaaggtttaattcaaccgggaccagatttggtggtgtgcgatgagggt
catttattgaaaaatgccaaaacatcgttgagcaaagcggtgaatcgtattcgaacattg
cgtcgcattgtgttaactggtacgccgcttcaaaataatctcaatgaatattattgtatg
gtgcaattcgtaaagcctaatttacttggtaaatacaacgagtatttgaatcgttttgta
aatccaatcaccaatggtcaatataccgattcaacaccgtttgatatacaaatgatgaag
cgtcgatcgcacattctccacaaattgctcgacggatgcgtacagagacgagattactcg
gtgcttgcacccttccttccaccaaaacaagaatacgtgctttatattcgaatgaccaaa
cttcaagtggatttgtacaagtattacatggccaatcgaccggcacaaaatgaatcgggg
aagactcgttcatcgattttattccaagacttccaaaatctacaacgaatttggacacat
cctcgtgtattaagatacaacagtgatcgctatgaacaaatggcgcaaaagaaaaaattc
atggcaagtgatgatgaagagggttcgctgaaggacttcatcgatgacgatgacgacgat
tccgatttggataacagtacatccgactcatcggacgcatcatcaaatgattcatctgtg
caatcggttcactcggacaaaccgtcgaatagcaaaaagtcacaagcgtcgaatagcgta
gctgtgcgccgaaccagagcaacggccaaggactttgaggaagagccaattgagccaatc
aaagaagagaatccaaccgaatggtggatgccattgtgccctgaagaagaattgaataat
attgagtattcgggaaaattgatgctgcttttctcaatacttgcggaatgtgaagcttgt
ggtgacaaattacttgttttttcgcagagcttgttttcactcgatgtcatcgaacatttt
ttggcaatgatcgatgaaaatacacaaaatccgaatccagatgcaaaactgggctctttt
accggcagttggacacgtggcattgactatttccgcttggatggatcaactaacattgaa
acgagaaatgccaattgcattagtttcaacagcgaagacaactcgcaagcaagactcttt
ttaatttcgacacgtgctggtgggcttggtattaatttagtggcagccaatcgggtcatt
atatttgatgcatcatggaatccatcgcatgatattcaaagcattttccgaatataccgt
ttcggacaaaagaaaccatgctacatttaccgattcatagcattgggcacaatggaagag
aaaatttatgagcgtcaagtcaccaagttggctatatcaaagcgtgtcatcgatgaacat
caaatcgatcgacattataaagagaacgatttgaatgaattgtacaacattgaaaatatc
gatccagaagaagaacgtccccaaccgaaattgccaaaggatcgattgtttgctgaacaa
cttcacaaatatccagatcgaatttggaagtatcacgaacatgattcattgctcgaaaat
aaatcggaagaaacactgtcaaaagaggaaatcgaagctgcgtggaaagaatttgaagag
gagaaaaatcgaccagctgttactgcacaaagttttgttggctatccaacttatcaacga
gccgccggcgctggtccagttacgtcaaacaatatatttggttttcgtacggatattttg
ttgcaattgctaaacataaaagcacgccgcacttatccgggcaaccaaaacattgcggaa
atagttcctatacttctgaagcacttgtacgaaacgatggaaaagaatgacacatcgttt
tatcaagagttgctgtacatccagcaaacggaaatggcagcgccgtctcaaggaagctat
ctaacgcctcaaggtcatataatgcccgcgtattcgggacgtggtcgaccgcctttaaat
ccacaacacagtacggttcatatgcaacagcagcatttaattcagcaggcacaaaatagg
ctaatgaacatgaatggaaatccggcacggcaagccccacctcgtgtatcaccacaaatc
atcgaaatcgattag
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integrated database retrieval system
