Contarinia nasturtii (swede midge): 116336932
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Entry
116336932 CDS
T08003
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116336932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116336932
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
116336932
Prokaryotic type
Archaeal type
TFB
116336932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Sigma70_r4
ORC6
BRF2-like_C_cyclin_rpt
BING4CT
Motif
Other DBs
NCBI-GeneID:
116336932
NCBI-ProteinID:
XP_031617020
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MASTSRHEVLSNKVVCYAHPEAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEK
SGVDPSRVGGPENPLLSGGDLSTMIGPGTGSASFDSFGNAKYQNRRTMSSSDRALIAAFK
EISQMADRINLPKTIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKE
ICAVSKISKKEIGRCFKLTLKALATSVDLITTADFMSRFCANLVLPNMVQRGATHIARKA
VEMDIVPGRSPISVAAAAIYMASQASEEKRSQKEIGDIAGVADVTIRQSYKLMYPHASKL
FPEDFKFATPIHLLPSV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcacttcaagacatgaagttttatcaaataaagttgtgtgctacgcacatccc
gaagcaccactgattgaagactatcgagctggtgatatgatttgctccgaatgcggttta
gttgtgggagatcgtgttattgatgtcggttccgagtggcgaacatttagtaatgaaaaa
tcgggcgttgatccatctcgtgtaggtggtccggaaaatccacttttgagcggtggtgat
ttatcgactatgattggtcccggaactggatccgcatcatttgattcgtttggaaatgcg
aaataccaaaatcgccgcacaatgagcagttcggatcgtgccttaattgccgcatttaaa
gaaatctcccaaatggcagatcgtattaatttgccaaaaacaattgtggatcgtgccaac
aatctgttcaaacaagttcacgatggcaaaaatctcaagggtcgttcgaatgacgcaaaa
gcatcagcatgcttatatattgcatgccgacaagaaggagtaccacgaacatttaaagaa
atttgtgcagtaagcaaaatcagcaaaaaggaaattggacgatgtttcaaacttacactg
aaagcgcttgctacatccgttgatcttattacgaccgccgactttatgagccggttctgc
gctaatttggttttgccaaatatggttcaacggggggctacacatatcgcacgaaaagcc
gttgaaatggacatcgtacctggtcgttcaccgatttccgttgcagctgcggctatctat
atggcatcacaggcttcggaagagaagcgtagccagaaagaaattggagacatagctggt
gttgccgacgtaacaatacgtcaatcatacaaattaatgtatccacacgcaagcaagctc
ttccccgaggatttcaaattcgctacaccaattcatttattaccttctgtgtaa
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