Contarinia nasturtii (swede midge): 116336935
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Entry
116336935 CDS
T08003
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cns00535
]
116336935
04091 Lectins [BR:
cns04091
]
116336935
Proteoglycans [BR:
cns00535
]
Cell surface proteoglycans
Others
116336935
Lectins [BR:
cns04091
]
C-Type lectins
Others
116336935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Rpn9_C
Laminin_G_3
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
116336935
NCBI-ProteinID:
XP_031617023
LinkDB
All DBs
Position
Unknown
AA seq
2351 aa
AA seq
DB search
MDYFLTILWICSITSVGSAKVSFFGDSHVVMPLQEAKLSTNLRLRFRTRQDNGLLFLAAG
RTDYCLLSIDDGRIKLQFKINEHFTEVWSPLKVNDLQWHDISFQRYDTNVTIQIDEPIIR
KMLPPQTGELNVHFGVFFGGLGDYSEAYLNSVDNFRGCMSDVFYNNINVFKRARERTSHV
SSVHVLWTCSSEFDADQHQGISFVRDDSFVMIAKPAVHTGESWNMELKTIETVGMVLYNS
AADFIALEIVNSRIRFLVGKGSNAVELVSERNITDGKWHNVSISYSPFLVELVVDETVHS
ATFASKSSNILEIGEEYFVGGLSSFRQRKATQRGLKVQSFSGCIQNLMVDKHAVGFPHMK
VTHAVEVGCVWAYPCLEKDPCISSGTCQQHEHDDFICYCEQAYCIKADFNDHYKLFTRIE
ERELLSVNPLQLLEGDSIFLSTSAIDVLIDYTKLGIMEAGIVFNIVSPPKHGKIMIASEG
GGNNTVSGKVFSLIELSTDKVKYMHNGDEQSNDHMTIDLQFISSNREVIPEALFGKHRFV
LHANITPVNDAPVLRMNSNKVLRLTQGIPKIITPELLTADDPDSPPSSLLYSIVTPIEPD
SPAHNGVIEVSGKKSNTFTQEDINQGVVTYLVNSQTADDKSFDLTIQVSDGMETSEKAYL
PISILPLQLRMINNTGMVLVHKSVAFITPCNLSFVSNSDDDNIDVKYTIVKQPQFGNIQR
LRAVDSSWINVDFFTSNQIQLGQVRYIHNTDFPVHDDFKFTVSFGPIKSNKYDFRLTFTK
LKIGIQIQNSLQINGTKEKTITNSNLFHQTTPLQTFPRNIIYTVITPPRYGLIYVNGYPE
YAKEGDSFTQQDIDKHLIRYRTYQTCYSSFIDVFEFVISVPECDDVFGSIKIVYNPPEEL
SKMLSYQTRELIHVKEGDRAQLNRKQFEVLFNKFNFLMLKLSVPPRNGVLCNVNSETMKV
SQIDSFSLDKLYLGDIYYCHDDSETTTDSMYFLVMSDLNKDFQYVCEILVDITLVNDNAP
YRLDDKVFHVVRNKNKIVSPVDLRFIDPDINTNAIDIIYTKINSSTVEFCNAGSGRSLSE
FTQEDIDQGRILLKHLDNTEVNQVSFVVTDGQFQVPSKFDVIAADPFINITEKNATVVQE
SKYILIKMSDLAIETNLNIIPDEVEYTVLEGPNYGVLKILRRKFNGTIMARSNNNITSVK
NFTQTDVMRERLVYWNSDVASMDKIKYRVTAKGISAEGEIMIRIYPPAYWDLLQIRRNKT
LYVEESTSVMISRDILEIVHPNISPGDITYLVTSSPQHGYLEIQSITSDDEYNCKVFDQS
TINSEKMFYIQAGVNQSVDHFIFDVTNGITWLRGLMLKIVIIPENLYIQTQNVSVEEGKS
LKLEPMDMVPYSDYYRGKILEYRILQQPSFGDVKSETSKVNRFTHKQLESGTIYYIHDGS
ENSTDVIRLVAVSRNKESVPFDFYITIIQVNDEKPQVVTNTGLQMWVGGRSPIKTTDLMA
QDYDTPSDHIRFLLVNVVGGVVVHQDDVFSMPLTNFTQYEINENLVFFHHTSNKLNGQID
FYVTDGDHSSPEQTLFITTNPVNLEQIHNEILHVFPLTRKQIMPEQLKFKCSDELRDVIY
EITINPQFGRIVYDHTDNRSSQEVSEFTQHDINEGRIVYEHTHPTVELKSNDSFYFDVKS
KFANSLIDQIFNIEISVSSGGLVRFLPVNRLNLDEGEKAPIKLDLSKVVEYLTTRAGIPS
PELFIDIYQPAHGIIAPIDGSRNLSRVSLDDFISEKVYYLHDHSDTIEDKIRLSVYLQQG
NIFLCNLTIPVVINPINDHEFYLVTQSPQMTIIEGENRTITKKELLTEDADTGPADIIYD
IISAPTIGILMKISDEGIAQDIMTYGNRFSQLDINENRILYVHNHLPQLTTFYFRVSDGK
FAPASEIFNLKVIPVTVGPGNEKDLVYMQQGANTTHIRETHFAVDTNADRNRLVYNVTDA
PKNGVLLCENRQTSRFTYNQLVNKKIVYFQSDMSKSSDKFMVTVYVPDTSQGILENVEVK
IIVEPLIKLNGISIASEDKIRLTTSFMDENPYQMKLNRYNPKIVITRKPDHGKIKKIIRN
TGDLEHSNDKDISSFTYKELKSGVIYFIARKLPEDVVSVNDYFEYALYVKPYQPGQSFVS
IEIHKLKSQLVDSIDKNDNVNIAYEASWTINYLFLIATLAAMFVLVLVLIVFLRCHSNSK
ANKNNIDKDYPALPRPPDFMNINNNRMYSPSDGEDSVTTSLPVLSSIPHCKVIPINNVDD
SESDEMIDLNNVSASQQLHQLPCYSPYGDEQDEWSSSCDVANEVNYSSILQPTLQRQQHS
NPLLRRNQYWV
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atggattactttttaacgattctatggatttgctcaattacttcggtgggatcggctaaa
gtttcgttttttggagacagtcatgtggtgatgccattgcaagaggcaaaattatctaca
aatttacgccttcgttttcgaacacgtcaagacaatggccttttattcttggctgccggt
cgaactgattactgtttacttagcatcgacgatggccgaatcaagctgcagtttaaaatc
aacgaacattttacagaggtatggtcaccattaaaagtgaacgatttgcaatggcacgat
atctcctttcagcgatacgatacgaacgtaacgatccaaatcgatgagccaattataaga
aaaatgttgccgccacagactggtgaattgaatgtgcatttcggtgtatttttcggcggt
ttgggtgactacagtgaagcctatttaaattcagtggataactttcgaggatgcatgtca
gatgtattttataacaacataaatgtgttcaaacgggccagagagcgaacatcgcatgtg
tcgagcgtacatgttttgtggacttgtagttcggaatttgacgctgatcagcatcaaggg
attagtttcgtacgtgacgattcatttgtcatgattgctaagccagccgttcataccggc
gaaagttggaatatggaattgaaaacaatagagacggttggcatggttctgtataatagt
gccgccgatttcattgcactggaaattgtaaattcgagaatacgatttttagtgggcaaa
ggatcaaatgcagtggaattggtatccgaacgaaatatcaccgatggaaagtggcacaat
gtttccatttcatatagcccatttctagttgagttggtcgtcgacgaaacagtacacagt
gccacatttgcaagcaaaagcagcaatatattggagattggtgaagaatactttgtcggc
ggcttaagcagttttcggcagagaaaagcaacgcaaagaggactcaaggtacaaagtttc
agcggttgcattcaaaacttgatggtcgataagcacgccgttggatttccgcacatgaaa
gtgactcatgccgttgaagtaggttgtgtctgggcatacccatgcttagaaaaagatcca
tgcatttcaagtggtacatgccaacagcatgaacatgatgacttcatttgctattgtgag
caggcatattgtataaaagctgattttaatgatcattacaagctgttcacgcgcatcgaa
gaaagagaattgttatcagtgaacccattgcagttactcgaaggcgatagcattttttta
tcgacatcagcgatcgatgttttaatcgattacaccaaacttggtataatggaagctgga
atcgtatttaacattgtttcgccgccaaaacatggtaaaataatgatcgcatctgagggt
ggcggcaataatacggtatcaggcaaagttttttcgttgatcgaattgagtacggacaaa
gtgaaatacatgcacaacggagacgaacagtcaaacgaccacatgaccatcgatttacaa
tttatatcatcaaatcgtgaagttatccctgaagcactttttggaaaacatcgattcgtt
ttacatgccaacataacaccggttaatgatgccccagtgcttcgcatgaactcaaataaa
gtgttgagattgacacagggcattccgaaaattataacaccggaattgttaacagcagac
gatccggatagtccaccgagttcattgctgtactcaatcgtaacgccaatcgaacccgat
tcacctgcacacaatggggtgattgaagtttcgggcaaaaagtcaaacaccttcactcaa
gaagatattaatcaaggtgttgtcacttatttggtgaatagtcaaacggccgatgacaaa
tcattcgatttgaccatacaagtttcggatggaatggaaactagcgaaaaagcatatttg
ccgatttcaatacttccactgcaattgcgcatgattaacaatactggaatggtcttggtt
cataaatccgttgcgtttattacaccatgcaatctttcatttgtttcgaattcagacgat
gacaacattgatgttaaatatacaatagtgaagcaacctcaatttggtaacattcaaaga
cttcgagcggttgattcgtcttggataaatgtcgattttttcacaagcaatcaaatacag
ttgggtcaagttcgatacattcataacacggatttcccagttcatgatgattttaagttc
accgtatcgtttggtccgataaagagcaacaaatacgattttcgtttgacattcaccaaa
ctaaaaatcggcatccaaattcaaaactcgctgcaaattaacggaaccaaagaaaaaacg
atcaccaattcgaatcttttccatcaaacaacaccattacaaacatttccccgaaatata
atctacaccgtaatcacaccgccgcgatatggcttaatctatgtgaatggttacccggag
tatgcaaaagaaggtgattcgtttacgcaacaagacattgacaagcatttgattcgatat
cgaacgtatcaaacgtgttactcgagttttattgatgtctttgagtttgttatatcagtt
cccgaatgcgatgacgtatttggtagcattaaaatagtttataatccaccggaggaacta
tcaaaaatgctatcttatcaaactcgtgagttgattcatgttaaagaaggtgatcgagcc
caattgaatcgaaaacaattcgaagtattgttcaacaaattcaattttctaatgttaaag
ttatcagttccaccacgaaatggtgtattatgcaatgtgaatagtgaaaccatgaaggta
tcacaaatcgattcattttcattggacaaattgtatttgggcgatatttattattgtcac
gacgattcggaaacgacaaccgattcaatgtactttttggtaatgtccgatttgaacaaa
gattttcaatatgtttgtgagattctggtcgatataacactggtcaatgacaatgcaccg
tatagactggacgataaagtttttcatgtagttcgaaataagaataaaatcgtaagtccc
gtcgatcttcgttttatcgatcccgatatcaatacgaatgctatcgacattatttatacg
aaaatcaattcgtcgaccgttgaattttgtaatgctggctctggtcgatctttaagcgaa
ttcacacaagaggatattgatcagggcagaattctactgaaacatttggacaacacggaa
gtgaatcaagtttcgtttgttgtgactgacggacagtttcaagtgccaagtaaatttgat
gtcattgctgccgatccattcataaatattacggagaaaaatgcaaccgttgtacaagaa
agcaagtatattttaatcaaaatgagcgatttggcgattgaaacgaatctgaatattatt
ccggatgaagtcgagtatacggtgcttgagggaccaaattatggcgttttgaaaatttta
cgacggaaattcaatggaactattatggctagatccaataataacataacttcggtgaaa
aatttcacacaaaccgatgtcatgagagaacggctcgtttattggaattcggacgtagcg
tcgatggataaaatcaagtatcgagtgacagccaaaggaatctcagcggagggagagata
atgattcgaatttatccgccagcttattgggatctacttcaaattcgacgaaacaaaact
ctgtatgtggaagagtccaccagtgtcatgatttcacgcgatattttagagatcgtgcat
ccaaatatttcgcctggcgacataacctatttggtaacgtcatcgccgcagcatggctat
ttggaaattcaatcgataacctctgatgatgaatacaattgcaaagtattcgatcagtcg
acaatcaattcggagaaaatgttttatattcaagctggtgtgaatcaatcagtcgatcac
ttcatatttgatgtgacgaatggcataacttggctgcgagggctaatgctaaaaatcgtc
attataccagagaatttgtacattcaaactcaaaacgtttcggttgaagaaggaaaatca
ttgaaactagagccaatggatatggttccatattcggattactatcgcggaaagatcctt
gagtatcgaattttacagcagccatcatttggtgatgtaaaatcggaaacgtcgaaagtc
aatcgtttcacacataagcagttggaaagtggtacaatttactacatccatgacggaagt
gaaaattcaacagatgtcattcgcttggtggctgtttcacgcaacaaggagagtgtgcca
tttgatttctacattacgatcattcaagtaaacgatgaaaagccacaagtcgtaacaaat
acaggtctacagatgtgggttggcggaaggtcgcccatcaaaactacggacttaatggca
caagactacgatacaccatccgaccacatcaggtttttgttggtaaatgtagttggtggt
gttgttgttcatcaagatgacgtctttagcatgccattgacaaattttacgcaatatgaa
atcaacgagaatctcgtatttttccatcatacatcgaacaagctgaatggtcaaatcgac
ttttatgtaaccgacggcgatcacagtagcccagagcaaacattgttcatcacaacgaat
ccggtgaatttggagcaaatccacaatgaaatattgcacgtatttccattgacacgaaag
caaataatgccagagcaattgaaattcaaatgttccgatgaacttcgcgatgtcatttat
gagataacaataaatccacaatttggtcgaatcgtttatgatcacacagacaatcgaagt
tcacaagaagtcagtgaatttacccagcacgatataaacgaagggcgaattgtttatgaa
catacacatccaaccgttgagctgaaatcaaatgattcattttactttgatgtgaaatca
aagtttgccaatagtttgatcgatcaaatattcaatattgagatatcggtgtcatcgggt
ggtttggtgcgatttttaccggtaaatcgattgaatttagatgaaggtgaaaaggcaccg
attaaattggatttgtcaaaagttgtcgagtatttaacgactcgagcgggaattccatcg
cctgaattattcattgacatctatcaaccggcacacggtataattgcgccaattgatggt
tcacgaaacttaagccgagtctctttagatgattttatttccgaaaaagtttactatttg
catgaccattccgataccatcgaggataaaattcgattgtcggtgtatttacaacaaggc
aatatattcctgtgcaatctaacgattcctgttgtcatcaatccgatcaacgatcatgaa
ttttatttggtcacacaatcaccgcagatgacaataatcgaaggagaaaatcgcacgata
acgaaaaaggagctattgactgaagacgcagatacgggaccggctgacattatttatgat
atcataagtgcacccaccattggaattttgatgaaaatttcagacgaaggaattgcacaa
gacattatgacttatggcaatcgattttcacagttggacattaatgaaaatcgaattctg
tacgttcacaatcatttgccacagctgacgacattttattttcgagtttctgacggaaaa
tttgcaccagcgtcggagattttcaatttaaaagtaataccggtcactgttgggccagga
aacgaaaaagacctggtttatatgcaacagggtgcaaatacaacgcatattcgtgagaca
cattttgcagttgatacaaacgccgatcgcaatcgactggtgtacaatgttaccgatgca
ccaaaaaatggtgttttgctgtgcgaaaatcgacaaacgagccgatttacatacaatcaa
ttggtcaacaagaaaattgtttactttcaaagtgatatgtcaaaatcgagcgataaattc
atggtaacagtgtacgttccggatacgagtcaaggaatactcgagaacgtcgaggtgaaa
ataatcgtcgagcctctaatcaaactcaatggcatatcaattgcatcagaagataaaatc
cgtttaacaacatcgttcatggacgagaatccctatcaaatgaaattaaatcgttacaat
ccaaaaatagtgatcacccgaaaaccggatcatggaaaaataaagaagatcattcgaaat
acaggcgatctagagcattcaaatgataaagacatatcgtcatttacatacaaagagctg
aagagtggtgttatctatttcattgctcgcaagctacccgaagacgtcgtctcagtgaat
gattactttgaatatgctctgtatgtgaagccatatcagccaggccaatcgtttgtttcg
attgaaatacacaaactgaaatcacaactagtcgatagtattgataagaatgacaatgta
aatattgcatacgaagcatcatggacgataaattacttatttttaatcgccacattggcg
gcaatgtttgttctagtcttagttttgatcgtctttttgagatgccattcgaattcaaag
gcaaacaaaaataacatcgacaaagactatccggcactgccacgtccgcccgatttcatg
aacatcaataacaatcgcatgtattcaccatcggatggcgaagactcggtgacaacatca
ctgcctgtgcttagcagtataccacattgcaaagtgattccgatcaataatgtcgacgat
tcagagtccgacgaaatgatcgacctgaataatgtaagtgcatcacaacagctccatcaa
ttgccgtgctattcaccgtacggagatgaacaagacgaatggagttcatcgtgtgatgtg
gccaacgaagtcaattactcatcgatattgcaacccacattacagcgacaacaacattca
aacccgcttttacgtcgcaatcaatattgggtgtga
DBGET
integrated database retrieval system
