Contarinia nasturtii (swede midge): 116337131
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Entry
116337131 CDS
T08003
Name
(RefSeq) nucleolar transcription factor 1-B-like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116337131
03021 Transcription machinery [BR:
cns03021
]
116337131
Transcription factors [BR:
cns03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
116337131
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
116337131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Myb_DNA-bind_6
UvrB
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
116337131
NCBI-ProteinID:
XP_031617331
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MEEQKSPNKTLKKKRVKSNSQVVDTDDTDNELPDYNGVDSTLHINDDSFSSDGGWSSDDD
RKLVQKVKSTSKQSDKVSYKTRLKQLDWNEIAFKSYSAKDCENRFQNHLKHVRRHRNLNE
IVTDIETNIKKCPIKKPLNSYQLFIQDQLTHVKSSGDFSETMKNLSSLYKELSPEERSSY
ERKAEQLRLEYKQKKEDFKSGNISKAASTPVTKAKTPFMLYAESKKSEEIDYSTLRESYT
NMALDEKYKWVIKAVSEAQDGSENVSKILNKEEQRIFKGQIKSTPSAYSLYVKETYNKIK
GRMEEPQDSKNIFTEIALQWKSLDPKKKKIYTNAAILLKEKAAKEQEAFNVRHGVTPQKV
KRRKSTFVERPPEDDDDLDDEEATVQPKVKRQKTSNANHSDSEETKPKHIQIKLNFKRSS
PKPSSVKKSIVTPSPVKEIKLGQSPVKESPVKESPVKESPVKESPVKEEKKKKKKATSES
SEYNEPSGSDAASSTISSSSKKKSKKERKSIVEPPGEKPPSDIITYFAKKYNIGKARKAQ
KAYDKLPKKERKQIKAEYNEITESYVARLKNYLESIPKNEAVAYIAKVKAVDDAEKDNRD
ANYTGDDGSSSQEY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacaaaaaagtccaaacaagacattgaaaaagaagcgcgtcaaaagcaattca
caagttgtagatactgatgatacggacaacgaactgcccgattacaatggcgtggacagc
actttacacataaacgatgacagtttttcaagcgatggtggctggagcagcgatgatgac
cggaagcttgttcagaaagtaaaatcaacatcaaaacaaagtgacaaagtcagttacaaa
acgcgcttgaagcaattggactggaatgaaattgcatttaaaagttattcggcaaaggat
tgtgagaatcgatttcaaaatcatttgaagcatgttcgtcgccatcgtaatttaaacgaa
attgtcactgacatcgagacgaatatcaaaaaatgcccaataaagaaaccattaaacagc
taccaactgttcatacaagatcaattgacccatgtcaagtcaagtggggatttctctgaa
accatgaaaaatttaagctcattgtacaaagaactatcgcctgaagagcgttctagttac
gaacgaaaggccgagcagcttcggctcgaatataaacaaaagaaagaggattttaaatcg
ggcaacatttcaaaggctgcatccacaccagtgacaaaagcaaaaacaccatttatgctg
tatgcggaaagtaaaaaatcggaagagatcgattacagcacattacgtgaaagctataca
aatatggctctggatgaaaagtacaaatgggtcattaaagctgtcagtgaagcccaggat
ggatcggaaaatgtttcgaaaatattgaacaaagaagagcagcgaatcttcaaaggtcaa
atcaaatcaacaccatcagcatacagtctgtatgtgaaagagacttataacaagatcaaa
ggcagaatggaagaaccgcaagattccaaaaatatattcacggaaattgctcttcaatgg
aaatcgctcgatccgaaaaagaagaaaatatacaccaatgctgctattttgttgaaagaa
aaagcagccaaagaacaagaagcgttcaatgtgcgccacggtgtaacgccacaaaaggtg
aaacgaaggaaatcgacattcgttgaacgaccacccgaagacgatgatgatttagatgat
gaagaggccaccgttcaaccaaaagtaaaacgacaaaagacatcgaatgctaatcactcc
gactccgaagagaccaaacctaaacatattcaaataaagttaaactttaaacgttcttca
ccaaaaccatcgtcggttaagaaatcgatagtgactccgtcacctgtgaaggaaattaaa
ttgggtcaatcgcccgtcaaggagtcgcccgtcaaggagtcgcccgtcaaggagtcgccc
gtcaaggaatcgcccgtcaaggaagaaaaaaagaaaaagaaaaaagccacttcagagtca
agtgaatacaatgaaccaagtggaagtgatgctgcttccagtacaattagctcaagttca
aagaaaaagtcgaaaaaggagaggaaatcaatagtggaaccgcccggtgaaaagccacca
tcggacataatcacctattttgccaaaaaatacaatataggcaaagcacgtaaagcgcaa
aaggcatacgataaattgccgaagaaagaacgcaaacaaatcaaagctgaatataatgaa
atcaccgaaagttatgtggcacgactgaagaactatttggaatcgataccgaaaaatgaa
gccgttgcttatattgcaaaagttaaggcagtcgacgatgctgaaaaagataacagagat
gccaattataccggagacgatggtagtagctctcaagaatactaa
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