Contarinia nasturtii (swede midge): 116337401
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Entry
116337401 CDS
T08003
Name
(RefSeq) 60S ribosomal export protein NMD3
KO
K07562
60S ribosomal export protein NMD3
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
cns03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116337401
03008 Ribosome biogenesis in eukaryotes
116337401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116337401
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
116337401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMD3
NMD3_OB
NMD_SH3
Motif
Other DBs
NCBI-GeneID:
116337401
NCBI-ProteinID:
XP_031617797
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MDYIDSDVHLKSESSTTNSKILCCECGTLIDPNPANMCAACLRNNVDITEDIPKQAVLYF
CRNCERYLQPPSEWVQCTLESRELLALCLRKMRGLKDVKLIDAGFIWTEPHSKRIKLKMT
VHKEVFGGAILQQVFIVEYIVTNQMCDDCHRTEAKDFWKCLVQVRQRSENKKTFYYLEQL
MLKHKAHENTLGIKPEHGGLDFYYANENHARKMLDFLNTMLPIKSTESKRLISHDIHSNT
YNCKFTFAVDIVPISKDSLVCLPKKLAQQLGSISQICLVARVANTIHLIDPLTAQMAEVN
ATVYYRHAFEAICNPKQLTEYIVMDTEVIMQKDRKFFPGQGKVSDRHVVCDIWLVRASEL
GINDNTIHTRTHLGHLLKPGDSVLCYNLIDANINDDNFEKLNKDRVPDLVLVKKFYSDFN
ARKNGRLWKLKHLSEDVTAFDRGQKDYNEFLNDLEEDPQLRQNVNIFKDSSKIIPVDVND
GIDPSVPRITLEEMLDDLVLEDDDMGETDEMAATE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggattatatagattcagatgtccatttaaaatcggaaagcagcacaacaaattcaaaa
atattgtgttgtgaatgtggtacattgattgatcccaatccagccaatatgtgcgctgcc
tgtctgagaaataatgtggatataacggaagatattcccaagcaggcagttctatatttc
tgtcgtaattgtgaacgatatttgcagccaccatcagaatgggtccaatgtacactggaa
tcgcgtgaattacttgcattgtgtttgcgaaagatgagaggtttgaaagatgtgaaactg
attgatgctggattcatttggaccgaaccacattcaaagcgaatcaaattgaaaatgaca
gtgcataaagaagtgtttggtggtgcaatattgcagcaagtctttatcgttgaatacatt
gtaactaatcaaatgtgtgacgattgtcatcgcaccgaggccaaggacttttggaagtgt
ttggttcaagtgcgtcaacgttccgagaataaaaagacattttactatttggaacagttg
atgttgaaacataaagcgcatgaaaatacattgggtatcaaaccggaacatggtggtctt
gatttctattatgccaacgaaaatcatgctcgcaaaatgttggactttttgaacacaatg
ttaccaatcaaaagtaccgaatcgaagcgtctcatttcacatgacattcacagcaacact
tacaattgtaaattcacatttgccgttgatattgtaccgatttcaaaggatagcttggta
tgtctgccgaaaaaattagctcaacagcttggtagcatttcacaaatctgcctagtcgct
cgtgttgcgaacacaatacatttaattgatccacttacagcacaaatggccgaagtaaat
gcaaccgtctactatcgtcacgcattcgaagctatttgcaatccaaaacaattgaccgaa
tacatagtaatggacacggaagtgattatgcaaaaggatcgcaaatttttccccggccaa
ggaaaagtttcagaccgtcatgttgtatgtgatatttggttggtcagagcttctgaattg
ggtatcaatgataataccatacacacacgaacacatttgggccatttattgaaaccgggc
gattcagttctatgctataatctcatcgatgccaatataaacgatgataactttgagaaa
ttaaacaaggatcgtgttcccgatttggttttggttaagaaattctacagtgatttcaat
gcacgaaagaatggacgtctttggaagctaaaacatttatcagaagatgtaaccgctttt
gatagaggacaaaaggactacaacgaatttttgaatgatttggaagaagatccacaattg
cgtcaaaatgtcaacatttttaaagattcatcaaaaataattccagtggatgtgaacgat
ggcatcgatccatctgtaccccgtattactttggaggaaatgttggacgatctggttttg
gaagatgatgatatgggcgaaaccgacgaaatggccgccacagaataa
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