Contarinia nasturtii (swede midge): 116337628
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Entry
116337628 CDS
T08003
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04137
Mitophagy - animal
cns04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116337628
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116337628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cns04121
]
116337628
Enzymes [BR:
cns01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
116337628
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116337628
Multi subunit type E3
ERAD complex
116337628
LMBR1L-GP78-UBAC2 complex
116337628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
CUE
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
G2BR
zf-rbx1
zf-ANAPC11
zf-RING_16
zf-RING_5
Prok-RING_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
116337628
NCBI-ProteinID:
XP_031618172
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MPIVLLDRLRLPNLRLYTSISVVVVSCSLYYAISSTSDPFWRLDNNTTASDSFFSLNTES
NQVVDHVVNGLDLGSVLSDKKEADGSILTGWNGNVEHHTQQQPHQQQHVVNQIFSQFTAD
QRKLFNDTRTIGNKFKDVVSFMVQEPICVWTVINMAYCCLILLGKSIQKLVFGELRISEQ
QHLKDKFWNFVFYKFIFVFGVVNVQFLHEVVLWVSWFSILGFLHLISQLCKERFEYLSFS
PTTPGWSHLRLVALLSTILVLSGFMFIVCVGVGFFGGLNTFAFMAAECVMLIIRTLHVLI
RYGIFLYDMRQSTVSSEGVSWDKRGPVAYYVELGFEVSTLVIDLLHHIHMLIWSNIFLSM
ASLVIVMQLRYLIHEIQRKVKKHRNYLWVLNHMEKTYPLATAEDLSNNSDNCAICWEKMD
TARKLPCSHLFHNSCLQSWLEQDTSCPTCRLGLSVQNFANIPDIERIIDEQENTTRANNH
FFHFNGSRYVSWLPNFSVEVTPINNVLRTNPVVPSNGMTSQLHNMARQVQQMFPRYPLST
IISDLGLSRSMEVTIDNILEGRLLVPGGRFDFDDDNPFNEFTTTSNEQHTDELSRHSSEN
DSNSSNSNNNSTTNSISSTNSSLNMADIGYEIEQSTNIFGNHNDLLRDESANEELSLGDR
FSKSHSEREKILQQRKESMLALARKRYFEKNKTELSAEQSSRNESMIV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcgtgctgttagatcgacttcggttgccgaatctacgactgtatacgtcaatt
agtgtggttgtagtcagttgctctttatattatgcaataagttcgacaagtgatcccttt
tggcgattggacaacaatacaacggcatccgattcatttttctcattgaatacggagagc
aatcaagttgttgatcatgttgttaatggtttggacttgggcagcgttttaagtgacaaa
aaagaagcagacggaagcattttaaccggttggaatggaaatgttgaacatcatacgcaa
caacaaccacatcaacaacaacatgtggtcaaccaaattttttcccaattcactgctgat
caacgaaaactattcaatgacacaagaaccattggcaataaattcaaagatgttgtatct
ttcatggtacaagaaccaatatgcgtgtggaccgtgataaatatggcatattgctgtctg
attttattgggcaagtcaattcaaaaattagtttttggcgaactgcgtatctctgagcaa
caacatttgaaagataaattctggaattttgtcttctacaaatttatattcgttttcggc
gtggtcaacgtacagtttcttcatgaggttgtactgtgggtgtcatggttttcgatactc
ggttttttgcatttaatttcgcaactgtgtaaagaacgcttcgaatatctgtcgttctca
ccaacaacgccgggatggtctcatttgcgactcgttgcattgctgtcaacaatccttgtt
ttgtccggttttatgttcatcgtatgtgttggcgttggttttttcggcggactgaataca
ttcgctttcatggccgcagagtgtgttatgctgataataagaacactgcacgttctcata
cgctatggaatctttttgtatgacatgcgtcaaagcaccgtttcatctgaaggtgtttca
tgggataaacgtggcccagtcgcttattatgttgaactaggatttgaagtcagcactcta
gttattgatcttctgcatcatattcatatgttaatttggagtaatatctttctgtcaatg
gctagcttagtaattgttatgcaattacgttatttaatccatgaaattcaacgtaaagtg
aaaaagcatcgtaattacttatgggttttgaaccacatggaaaagacctatccgctcgca
accgccgaagatttatcgaataactcagataattgtgccatctgctgggagaaaatggac
acagctcggaagcttccttgttcacatctatttcataattcatgcttgcaatcttggctg
gaacaagacaccagttgtccaacgtgtcgattgggtttgagtgtgcaaaattttgccaat
attccggatattgaacggattatcgatgaacaagagaacaccaccagagccaataatcat
ttctttcatttcaatggttcacgttatgtttcttggctgccaaatttttcggtcgaagtc
acaccaataaataatgtgttgagaacaaatccagtagttccatcaaatggtatgacatca
caattgcataatatggctcgtcaagtgcaacaaatgtttccacgatatccattgtcaacg
ataatatcggacttgggattgtctcgatcgatggaagtaacaattgacaatatccttgag
ggacgacttctcgttccgggcggtcgattcgatttcgatgatgacaatccatttaatgaa
tttacaaccacatccaatgaacaacacacagacgaattgtcacggcattcatctgaaaat
gattcaaatagcagtaatagtaataataatagcacaacaaattcaatatctagtacgaat
agttccttgaatatggccgatattggctatgaaatagaacaaagtacaaatatatttggt
aatcataatgatcttttacgcgacgaaagtgccaatgaagagttgtcgttgggcgatcga
ttttcaaaaagtcactcagaacgtgagaagattcttcagcagcgcaaggaatcaatgtta
gctttagcacgaaaaagatatttcgaaaaaaacaaaaccgaactgagcgctgaacaaagc
agtcgaaacgaaagtatgattgtctaa
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