Contarinia nasturtii (swede midge): 116337640
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Entry
116337640 CDS
T08003
Name
(RefSeq) calcium-activated potassium channel slowpoke isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cns04040
]
116337640
Ion channels [BR:
cns04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
116337640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Tau95
Motif
Other DBs
NCBI-GeneID:
116337640
NCBI-ProteinID:
XP_031618193
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MSQTISIDSTTRAYVTTAASISDLGEEEKCLTERKWWCFLLSSIFTFLAGLTVVLLWRAF
AFLCCRKEPELSPNDPKQKEQKANRQGKQEFEGTFMTEAKDWAGELISGQTTTGRILVVL
VFILSIASLIIYFVDASNKYVEMCVRFSENITQQIDLAFNIFFMVYFFIRFIAASDKLWF
MLEMYSFVDYFTIPPSFVSIYLQRTWIGLRFLRALRLMTVPDILQYLNVLKTSSSIRLAQ
LVSIFISVWLTAAGIIHLLENSGDPLDFDNSQPLSYWTCVYFLIVTMSTVGYGDVYCETV
LGRTFLVFFLLVGLAIFASCIPEIIDLIGTRPKYGGTLKNEKGRRHIVVCGHITYESVSH
FLKDFLHEDREDVDVEVVFLHRKPPDLELEGLFKRHFTTVEFFQGTIMNPIDLQRVKVHE
ADACLVLANKYCQDPDAEDAANIMRVISIKNYSDDIRVIIQLMQYHNKAYLLNIPSWDWK
QGDDVICLAELKLGFIAQSCLAPGFSTMMANLFAMRSFKTSPDTQAWQNDYLQGTGCEMY
TETLSPSFTGMTFPQASELCFTKLKLLLLAIEIKGTEEGADSKISINPRGAKIQANTQGF
FIAQSADEVKRAWFYCKACHDDIKDETLIKKCKCKNLTAQPRNKFGDLDVGMIMMQTGMV
KHGLNSACHTYIDVATFRKGVRAVQMVGRAKDDDNLLPNDHHPAPTFTPPELPKRVHVRE
NMRGVTAADITRDREDINLINRNRRSNGGITGSSQQLNAQQQPQQIGAQQQQQQSANMQV
NSIKQVNKVKPNVNRQPPDNAVSPSTYNRPTEPEANPYAGYQLAYEVKKLMPTSRGGGSG
TQQGNGVSMPAGIADDQSKDFDFEKTEMKYDSTGMFHWSPARNLEDCILDRNQAAMTVLN
GHVVVCLFADPDSPLIGLRNLVMPLRASNFHYHELKHVVIVGSVDYIRREWKMLQNLPKI
SVLNGSPLSRADLRAVNVNLCDMCCILSAKVPSNDDPTLADKEAILASLNIKAMTFDDTI
GVLSQRGPEFDNMNTAGSPIVLQRRGSVYGANVPMITELVNDSNVQFLDQDDDDDPDTEL
YLTQPFACGTAFAVSVLDSLMSTTYFNQNALTLIRSLITGGATPELELILAEGAGLRGGY
STVDSLSNRDRCRVGQISLYDGPLAQFGEAGKYGDLFVAALKSYGMLCIGLYRFRDTSSS
CDASSKRYVITNPPDDFSLLPTDQVFVLMQFDPGLEYKPPSVRRATNVNTQSAGVGGGGS
NKDDNS
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaacaatatcaattgattcaaccacaagagcatacgtaacaacagcagccagt
atttctgatctaggcgaagaagaaaaatgtttgactgaaagaaaatggtggtgttttctg
ttgtcgagcatcttcacattcttggctggtcttacggtcgttttgctgtggcgtgccttt
gcttttttgtgttgtcgtaaggagccagaattatcaccaaatgacccgaaacagaaggag
cagaaagccaataggcaggggaagcaggagttcgagggcaccttcatgaccgaagccaaa
gattgggccggcgaactgatatcggggcaaacaacaaccggcagaattttggtggtgctc
gtttttatattaagtattgcatcgcttattatatattttgttgatgcatcgaataaatat
gttgagatgtgcgtccggtttagcgaaaatatcacacaacaaatcgatcttgcattcaat
atattttttatggtttacttttttatacgattcatagcagcatccgataaactatggttt
atgttagaaatgtatagcttcgtagattattttacaatacccccgtcctttgtatcaata
tatttacagcgaacatggatcggtcttcgtttcctgagagcgctgcgactcatgaccgtt
cccgatatattacaatatttaaatgtactaaaaacatcaagttcgatacgactggcgcag
ctagtttcaatatttatatcagtttggttaacagcggccggaataatacacttgctggaa
aattctggcgatccattggatttcgataattcacaaccgttatcatattggacgtgcgtt
tattttctaattgttactatgtcaacggtgggctatggagatgtctactgtgaaactgtg
ctggggcgaacgttcttagtatttttcctgcttgttggtttggcaatattcgcaagttgt
ataccagagataatagacttgattggaactagacccaaatatgggggaacattgaagaac
gaaaaaggtcgaagacatattgtcgtatgcggtcacataacctacgagtcggtgtcacat
tttctcaaggattttttgcacgaggatcgtgaagatgttgacgttgaagttgtattttta
catcgtaaacctcctgacttggaattagaagggctatttaaacgtcattttacaacggtg
gagtttttccaaggaactattatgaatcccatcgatctgcaacgcgttaaggtacacgaa
gctgatgcctgtttagttttagccaataaatattgtcaagatccggatgctgaagatgct
gccaatattatgcgagttatttcgataaaaaattacagcgatgacattcgagttatcatt
caattgatgcaatatcataataaggcttatttattaaatatcccatcgtgggattggaag
caaggagacgatgtgatatgcttggctgaactgaaattgggcttcatcgcacaaagttgc
ctagcacctggtttttcaaccatgatggccaacttatttgcaatgagatcattcaaaact
tcgccagatacgcaggcatggcaaaacgattatctacagggtacaggatgtgagatgtac
actgaaaccttatcaccttcatttactggcatgactttcccgcaagccagcgaattatgc
tttacgaaattaaagctacttttattggccattgagattaaaggtacggaagaaggtgcc
gatagcaaaatttccataaatccacgtggtgctaagatacaagcgaacacacaaggattt
ttcatagctcaaagtgccgatgaagtaaaacgcgcttggttttactgtaaagcctgtcac
gatgacataaaagacgaaacgttaatcaaaaagtgtaaatgtaaaaatttgactgctcaa
cccaggaataaattcggtgatttagatgtaggcatgattatgatgcaaactggaatggtt
aaacacggtctgaattcagcctgtcacacatacatcgacgtggccacgttcaggaaaggc
gtccgagccgtacaaatggttggacgagcaaaagacgatgacaacttgttaccaaatgat
catcatcccgcgcctacatttactcctccagaacttccaaaacgggtgcatgtgcgcgaa
aatatgcgcggagtcactgccgctgacattactagagatcgggaagatattaacttaatt
aatcgaaaccgacgatcaaatggtggtattacgggttcatcgcaacaacttaacgcgcaa
caacagccacaacagattggagcacagcagcaacagcaacaatcggccaatatgcaagtg
aattccataaaacaagttaacaaagtcaaaccaaatgtaaatagacaacctccagataat
gcagtctcaccatcaacgtataacagacctacggaacctgaagcaaatccatatgcggga
tatcaacttgcttatgaagtgaaaaaactcatgccaacgagtcgtggcggtggatctgga
acacagcagggcaatggtgtttcaatgccagctggcattgctgatgatcaatcaaaggat
ttcgattttgagaaaaccgaaatgaaatacgattcaactgggatgtttcactggagtcct
gcccgaaatttggaagattgtattttggatcgtaatcaagcagcaatgacggtacttaat
ggtcatgttgttgtgtgtttatttgccgatcccgattcaccattgattggactgagaaat
ttggtgatgccattgcgtgcatcaaattttcattatcatgagctaaaacatgtagtaatt
gttggttcggttgattacattcgacgcgaatggaaaatgctacaaaatttaccaaaaata
tctgtactgaatggatcgccattgagccgagctgatttacgtgctgttaatgtaaattta
tgtgatatgtgttgcatattgtcagcaaaagtgcccagcaacgatgatccaacgttggcc
gataaagaagcaattttagcatcacttaacatcaaagcaatgacctttgatgatacaata
ggcgttttaagtcaacgcggtccagagtttgataacatgaatacagcaggcagtccaata
gttttacagagaagaggctctgtctatggagcaaatgttccgatgattacagaattagtt
aacgatagtaatgtacagttcttagatcaagacgatgacgatgatccggatacagaacta
tatttaactcagccattcgcttgtggtacagcatttgccgttagcgtattagattcatta
atgtctacgacttactttaatcaaaacgccttaacattaattcgatcattaattacgggt
ggtgcaacacctgaactggaattaatattggctgaaggtgctggtcttagaggtggttat
agtactgtagatagtttaagcaatcgagacagatgtcgagtcgggcaaatatcgctgtac
gacggaccgctggctcagtttggcgaggctggaaaatacggtgacctttttgtagcggct
ttaaaatcttatggcatgctatgtataggcttgtacagatttagagacactagctcgagt
tgtgatgcaagtagcaaacgatacgtaatcacaaatcctccggatgacttttcgctactg
ccaaccgatcaagtcttcgttctaatgcaattcgatccgggtttggaatataaaccgccg
tcagtgcgtcgtgcaacaaatgtgaatacacagagcgccggtgtaggtggtggtggttcg
aataaagatgataactcctga
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