Contarinia nasturtii (swede midge): 116337658
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Entry
116337658 CDS
T08003
Name
(RefSeq) homeobox protein rough-like
KO
K09362
homeo domain only family, other
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116337658
Transcription factors [BR:
cns03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
116337658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
116337658
NCBI-ProteinID:
XP_031618274
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MHSNKSFVNVTKNGNTNVSISSARPSSPRQFFERLYGHLESSDTNSKAVCSPAQSELSSS
PDILDDRKSAYNLTADHVMGYQSSYQNISCLPSGFSGFRLPQESPLSAGLTAFLARRRRK
EGRPRRQRTTFSSEQTIRLEVEFHRNEYISRGRRFELAERLQLTETQIKIWFQNRRAKDK
RIEKAHIDQQYRHFAVANGFMTSISYPQMVQGLQLQSNEVASLHDQTHMSPLRSTSNRST
ASSLSQFYHEINKQTITTTDTNPAHNQFNQNVDNLSIRSLSNPIEII
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgaataaaagttttgtgaatgtaacgaaaaatggtaatacgaatgtttcgatt
agtagtgctcggccatcatcgcctcgtcaatttttcgaacgactttatgggcatttagaa
agtagcgatacaaattcgaaagcagtttgctcaccagctcaaagtgaactcagctcatca
ccagatattttagatgatcgaaaaagtgcatacaatctaaccgctgatcatgtgatgggc
tatcaatcgtcctatcaaaatatatcgtgcttaccatcgggatttagcggatttagatta
ccacaagagtcaccattatccgctggacttaccgcatttttagctcgacgaaggcgaaaa
gaaggacgaccgagacggcaacgaacgacattcagcagtgaacaaacgattcgcttagaa
gttgaatttcatcgcaatgagtatatatcacgtggacgtcgttttgaattagccgaacgt
ttacaattgactgaaacgcaaattaaaatttggtttcaaaatcgtcgtgccaaagataaa
cggattgaaaaggctcatatcgatcaacaatacaggcattttgcggttgcaaatggtttt
atgacatcgatatcttatccacaaatggtgcaaggattacaactacaatcgaatgaagtc
gcgtcattacacgatcaaacacatatgagcccattgagaagcacatcgaatcgctcgact
gcatcatcactttcgcaattctatcatgaaatcaataaacaaaccattacaacaacggac
acaaatcccgcccataatcaattcaatcaaaacgttgacaacctatccattcgatcacta
tcgaatccaattgaaattatttaa
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