KEGG   Contarinia nasturtii (swede midge): 116337703
Entry
116337703         CDS       T08003                                 
Name
(RefSeq) RNA exonuclease 5 isoform X1
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
cns  Contarinia nasturtii (swede midge)
Pathway
cns03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cns00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116337703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cns03009]
    116337703
Ribosome biogenesis [BR:cns03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    116337703
SSDB
Motif
Pfam: RNase_T DUF3972
Other DBs
NCBI-GeneID: 116337703
NCBI-ProteinID: XP_031618340
LinkDB
Position
Unknown
AA seq 639 aa
MKSSQPKKEARLEKKKRKLEALAEITKLNEIDKQSKSKMKHDLGEPIAKRPKESDTEQND
NANESDVRSVLSDEDYAQLKRELNHKKRELKNVPKLRTKLFGEMALLTIPSENRTPILFT
DIQHLIMYGLLGSTSPCVPTRWCHLEKINKISHTVVILIDGLSLYHFSSYESQLKSIERI
FEHKFEVVMPSSTKSTETMANEMMMAPLTNIFRSDLVDKYGSLEAAIDSTKNPVFMVNSI
FPVSDNASDNDEIDSKNGTQTVKTDGEVFSRTQLLLSALQMIDEGYPLPLRGELANRYKD
FVMTKDKYKAVTAQSPMFGVDCEMCRTSAGVNELTRISIINENHESIYETLVCPRNKIVD
YLTPFSGITPKMMKNVTKTLTEVQNDIQKLLPADAILVGQSLHSDLMAMRMMHPYVIDTS
VIFNISGERRRKSKLQTLAHEFLGEAIQKNPLGHDSIEDCSASLKLTKLKLQKGIDFGDA
ILVNKRRVNERNQIESTASESKDESTATTSTATNKMDRSTAVITSNDKFSEIYERIVKQK
IDNSNSDNKIHIYTNSSNKCAVQKTCEVALNHALSLTHMSIEPKKLDNDKVEKTIKKVDQ
WIENVWQSAAPNALFIVLFSGQHDTQSSGVAMLQVKSKA
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgaaatcatcacagccaaaaaaagaagctcgcctagaaaagaaaaagcgcaaattagag
gcactggccgaaataacaaaattaaacgaaattgataagcaaagcaaaagtaaaatgaaa
catgatcttggtgaaccaattgcaaagcggccaaaggaaagtgacaccgaacaaaatgac
aacgcaaacgaatctgacgttcgttcggttttatccgatgaagattatgctcagctgaaa
cgtgaattaaatcataaaaaacgtgaattgaaaaatgttcccaaactgcgcacaaaacta
tttggtgaaatggcattgttgaccattccgtcggaaaatcgaacgccaattttattcacg
gatattcagcatttaataatgtatggtttattaggcagtacatcaccatgtgtaccaacc
agatggtgtcacttggaaaaaataaataaaatctcacacaccgttgttattttgatcgat
ggattatcattatatcacttttcatcatacgaatcccaattaaaatcaatcgaacgaatt
ttcgagcataaatttgaagttgtgatgccgtcgagcacaaaatcaaccgagacaatggca
aatgaaatgatgatggcgccgttgaccaatatctttcgcagtgatctcgtcgataaatat
ggtagtttagaagcagcaatcgattcaactaaaaatcccgttttcatggtaaattctata
tttccagtgtcggacaacgctagcgataacgatgaaatcgattcgaaaaatggtacccaa
acggtgaaaactgatggtgaagtattttcgcgtacacaattactgctttctgcattgcaa
atgattgatgaaggctatccattaccactacgcggtgaattggcaaatcgttacaaagat
tttgtaatgacaaaggataaatataaagcggttaccgcacaaagtccaatgtttggcgtc
gattgtgaaatgtgtcgaacgtcagccggtgtgaatgaactcacacgtatttcgattatc
aacgaaaatcatgagagtatttatgaaactttagtttgtccacgaaataaaattgttgat
tatttaacaccattttcgggtattacgcctaaaatgatgaaaaatgtcacaaaaacactg
accgaagtacaaaatgacattcaaaaattactgccggccgatgcaatcttagtcggtcaa
tcattgcatagcgatttaatggcaatgcgaatgatgcatccgtatgtaattgatacaagt
gttatattcaacatatcgggcgaacgacgacgaaaatccaaactacaaacattggcgcat
gaatttctgggtgaagccattcaaaagaatccattaggtcatgactcaattgaagattgt
tcagcaagtttgaaattaactaaattgaaattacaaaaaggtatcgattttggtgatgca
attcttgtaaataagcgtcgagtaaacgaaagaaatcaaatcgaatcaacagccagcgaa
agtaaagatgaatcaacagcaacaacttcaactgcaaccaataaaatggatcgcagcacg
gctgttattacgtctaacgataaattcagcgaaatatacgaacgaattgtaaaacaaaag
attgacaacagcaacagtgataataaaattcacatttatacaaattcatcgaacaaatgt
gcggtacaaaaaacgtgtgaagttgctttgaatcatgcactgagcttaacacatatgtcc
atagagccgaaaaaattggacaacgataaggtagaaaaaacaattaaaaaggtcgatcaa
tggattgaaaatgtatggcaaagtgccgcgccaaacgcactttttatcgttctattttcg
ggacaacatgacacacaatcaagcggtgttgcaatgcttcaagtaaaatcgaaagcataa

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