Contarinia nasturtii (swede midge): 116337703
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Entry
116337703 CDS
T08003
Name
(RefSeq) RNA exonuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116337703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116337703
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-60S particles
RNases
116337703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DUF3972
Motif
Other DBs
NCBI-GeneID:
116337703
NCBI-ProteinID:
XP_031618340
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MKSSQPKKEARLEKKKRKLEALAEITKLNEIDKQSKSKMKHDLGEPIAKRPKESDTEQND
NANESDVRSVLSDEDYAQLKRELNHKKRELKNVPKLRTKLFGEMALLTIPSENRTPILFT
DIQHLIMYGLLGSTSPCVPTRWCHLEKINKISHTVVILIDGLSLYHFSSYESQLKSIERI
FEHKFEVVMPSSTKSTETMANEMMMAPLTNIFRSDLVDKYGSLEAAIDSTKNPVFMVNSI
FPVSDNASDNDEIDSKNGTQTVKTDGEVFSRTQLLLSALQMIDEGYPLPLRGELANRYKD
FVMTKDKYKAVTAQSPMFGVDCEMCRTSAGVNELTRISIINENHESIYETLVCPRNKIVD
YLTPFSGITPKMMKNVTKTLTEVQNDIQKLLPADAILVGQSLHSDLMAMRMMHPYVIDTS
VIFNISGERRRKSKLQTLAHEFLGEAIQKNPLGHDSIEDCSASLKLTKLKLQKGIDFGDA
ILVNKRRVNERNQIESTASESKDESTATTSTATNKMDRSTAVITSNDKFSEIYERIVKQK
IDNSNSDNKIHIYTNSSNKCAVQKTCEVALNHALSLTHMSIEPKKLDNDKVEKTIKKVDQ
WIENVWQSAAPNALFIVLFSGQHDTQSSGVAMLQVKSKA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatcacagccaaaaaaagaagctcgcctagaaaagaaaaagcgcaaattagag
gcactggccgaaataacaaaattaaacgaaattgataagcaaagcaaaagtaaaatgaaa
catgatcttggtgaaccaattgcaaagcggccaaaggaaagtgacaccgaacaaaatgac
aacgcaaacgaatctgacgttcgttcggttttatccgatgaagattatgctcagctgaaa
cgtgaattaaatcataaaaaacgtgaattgaaaaatgttcccaaactgcgcacaaaacta
tttggtgaaatggcattgttgaccattccgtcggaaaatcgaacgccaattttattcacg
gatattcagcatttaataatgtatggtttattaggcagtacatcaccatgtgtaccaacc
agatggtgtcacttggaaaaaataaataaaatctcacacaccgttgttattttgatcgat
ggattatcattatatcacttttcatcatacgaatcccaattaaaatcaatcgaacgaatt
ttcgagcataaatttgaagttgtgatgccgtcgagcacaaaatcaaccgagacaatggca
aatgaaatgatgatggcgccgttgaccaatatctttcgcagtgatctcgtcgataaatat
ggtagtttagaagcagcaatcgattcaactaaaaatcccgttttcatggtaaattctata
tttccagtgtcggacaacgctagcgataacgatgaaatcgattcgaaaaatggtacccaa
acggtgaaaactgatggtgaagtattttcgcgtacacaattactgctttctgcattgcaa
atgattgatgaaggctatccattaccactacgcggtgaattggcaaatcgttacaaagat
tttgtaatgacaaaggataaatataaagcggttaccgcacaaagtccaatgtttggcgtc
gattgtgaaatgtgtcgaacgtcagccggtgtgaatgaactcacacgtatttcgattatc
aacgaaaatcatgagagtatttatgaaactttagtttgtccacgaaataaaattgttgat
tatttaacaccattttcgggtattacgcctaaaatgatgaaaaatgtcacaaaaacactg
accgaagtacaaaatgacattcaaaaattactgccggccgatgcaatcttagtcggtcaa
tcattgcatagcgatttaatggcaatgcgaatgatgcatccgtatgtaattgatacaagt
gttatattcaacatatcgggcgaacgacgacgaaaatccaaactacaaacattggcgcat
gaatttctgggtgaagccattcaaaagaatccattaggtcatgactcaattgaagattgt
tcagcaagtttgaaattaactaaattgaaattacaaaaaggtatcgattttggtgatgca
attcttgtaaataagcgtcgagtaaacgaaagaaatcaaatcgaatcaacagccagcgaa
agtaaagatgaatcaacagcaacaacttcaactgcaaccaataaaatggatcgcagcacg
gctgttattacgtctaacgataaattcagcgaaatatacgaacgaattgtaaaacaaaag
attgacaacagcaacagtgataataaaattcacatttatacaaattcatcgaacaaatgt
gcggtacaaaaaacgtgtgaagttgctttgaatcatgcactgagcttaacacatatgtcc
atagagccgaaaaaattggacaacgataaggtagaaaaaacaattaaaaaggtcgatcaa
tggattgaaaatgtatggcaaagtgccgcgccaaacgcactttttatcgttctattttcg
ggacaacatgacacacaatcaagcggtgttgcaatgcttcaagtaaaatcgaaagcataa
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