Contarinia nasturtii (swede midge): 116337812
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Entry
116337812 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116337812
KO
K23112
BRCA1-associated ATM activator 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cns03400
]
116337812
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116337812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
TOR1L1_N
ZipA_C
HEAT_2
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
116337812
NCBI-ProteinID:
XP_031618571
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MSSGTKVLLDVGDKYKTVLSALIQQNYHVINDVYLDMFISHVSGKNGEDYSTLLTDQFTF
DWIEKSISKIFDEHTKSVNGLAFTCQLIALLTENPEHFRQLSERNVYKNIKNGMNEATDL
QNPSAKLALITLFQSMLKHDAGIEWLKAEHAWQQAINYCIQDETIYVVRRAKEFITEFLF
RIANDENLCLEVIVKIAQPINDNVYNGMEGTMDVCVDSCDLQHKVTPSINIICNVLERYI
QLNQKSSIAHHIIKTTKGQMNLWKLTDMTHDRVLFNQITQCLIYLSFALLVDKLNENKIP
DNSPISVIDFNDFGLTFLNTCKMCILRNQNETLLNGARLYYVLWKSMGDRVPEEIILGNQ
LTKFENQVILFQILPLINVMHHGDNCYPELLDDYVMKLFHISTEHTLRICYSFRNSVING
NVDLYDMASKAIQGILSMIHILHRDRAVIVFQALCHIIKGVARNEQSNELPLIARPNFMS
SVLTGLYSIVKKYRITWKDSYEAVGLLNCMLYSIEDPNLSPRLAVEVLKLAQLSVEHFMA
PNLALLVDTLSGSDMQKLGPMIVKRLHDSNWEVRDSVLELLTSIANISVYKFPAFQEHIL
SNGLCPLVVDIAKNDSEYYVRASALNCISKMIPVNLFWEQCFAALDLVTYLIKVIKTEYE
GVVRKESVSLITCIYENQKVPSNQLDSIYEALAVAATHDLFWEVKVKAIEFWHCVIRRQL
QYQGVIDGTFPSVTFSKENKKIVTLTQKEITLRLTKVLVKLSTFGCLGVLLASLNDEDDL
LVVKKGVNVLKSLIEFLDKYNYWIELDDKNTNNIARSQSNDSSISADTMNSSKDIDEEMK
DITNEKIAPNESTDPNSNSMNSDDVIQAIVLAQDINLLSKAYENQMNVECGAGSETSSKS
IEENAEYFRYLREITPEIFLNKMKTTDLNNVLQTRTEWLAQTESFSSLLNDMSYSLQAHE
QHDADCY
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgggaacgaaggtgctcttggatgttggtgataagtataagacagttctcagt
gcgcttatccaacagaattaccatgttataaacgatgtttatctcgacatgttcatttca
catgtatcggggaaaaatggagaagactattcaacattgttgaccgaccaatttacgttt
gactggatcgagaaatcgatatcaaaaatatttgacgagcatacgaagagcgtaaatggt
ctggcttttacgtgtcaactcattgcattgttgacagaaaatccggaacattttcgtcaa
ttgtccgaacgaaatgtatacaaaaacataaaaaatggcatgaatgaggcgacagatttg
caaaatccatcggcaaagctggcattgataacattgtttcagtcaatgttaaaacacgat
gctggcatcgaatggttaaaagccgaacatgcatggcaacaagcaatcaactattgcatt
caggatgaaacgatttatgtggtgcgccgtgccaaggaattcataactgaattcttattt
cgaattgcaaacgatgaaaatctatgtttggaagtgattgtcaaaattgctcaaccaata
aatgacaatgtttacaatggcatggaaggaactatggacgtatgcgttgacagctgcgat
ttgcaacacaaagtcacaccatcaatcaatataatttgcaatgtacttgagagatacatt
cagctgaatcagaaatcatcgatagcgcatcacattataaaaacaacaaaaggtcaaatg
aatttatggaaacttactgatatgacacatgatcgtgtacttttcaatcaaattacacaa
tgtttgatttacttgagctttgcattgttggttgataaactgaatgaaaataaaatccct
gataatagtccaatatcagtgattgatttcaatgatttcggtttgacgtttttaaataca
tgcaaaatgtgtattttacgaaatcaaaacgaaaccctgttgaacggtgcacgtctgtat
tatgtattatggaaaagtatgggcgatcgtgtacccgaagaaattattcttggcaatcaa
ttgacaaaatttgagaatcaagtgattctctttcaaatattaccgctcataaatgttatg
caccacggcgataattgctatccagaactattggatgattatgtgatgaaattatttcac
atttccactgagcacacactgagaatttgttattcattccgaaattcggtaatcaacggt
aatgtggatctgtatgatatggcgagcaaagcaattcagggaatattatcaatgattcac
attttacatcgcgatcgtgctgttattgtgtttcaagcattgtgtcacatcatcaaagga
gtcgcaagaaatgaacaatcaaatgaactaccattgattgcccgaccaaattttatgtca
tcagttctaaccggactctattccatagttaaaaaatatcgcatcacatggaaagattca
tacgaagccgttggtcttctcaattgtatgctttattcgattgaggatccaaacctatca
ccgaggctggcagttgaagtgctaaaattggcccaactttccgtcgaacattttatggct
ccgaatttggcattgctagttgatactctatctggttcagatatgcaaaaactaggacca
atgattgtaaaacgtctacatgacagcaattgggaagttagagatagtgtactggaattg
ctaacatcaatagcaaacatatcagtatataagtttccggcattccaagagcatattttg
agcaacggtttgtgtcctcttgttgtagatatagcgaaaaacgatagcgaatattatgta
cgcgcatcagcattgaactgtatttcaaaaatgattccagtaaatctgttctgggaacaa
tgctttgctgcccttgatttggttacatacttgattaaagttataaaaaccgaatacgaa
ggtgttgttcgcaaagagtccgtatcattgatcacatgcatctatgagaatcaaaaagtt
ccgtccaatcaattggattcaatatatgaagcgttagccgttgctgccacacacgattta
ttctgggaagtaaaagtgaaggcaattgaattttggcattgtgtcatcagacgtcagctt
caatatcagggagttatcgatggaacatttccgtcggtgacgttttcaaaggaaaataaa
aaaattgtcacactaacacaaaaagaaatcacattgcgattgacaaaagtactggtaaaa
ttgtcgacgtttggctgtttgggtgtactgctagcgagtttaaacgatgaagatgatttg
ttggtggtaaaaaaaggcgtcaatgtgcttaaatctctcattgaattccttgataaatac
aattactggattgagttagacgataaaaacacaaacaatatagcacgatcgcaatcaaac
gattcatcaataagtgcagacacaatgaattcttcaaaagacattgatgaagaaatgaag
gacataactaatgaaaaaattgctcccaatgaatcgaccgatccaaatagcaattcaatg
aattcagatgatgttattcaagcgatagttttggcgcaggatattaatctactgtcaaaa
gcctatgaaaatcaaatgaatgtagaatgtggggctggtagcgaaacatcgagtaaatca
atcgaagaaaatgcagaatattttaggtatttacgcgaaattacgcccgaaatatttttg
aataaaatgaaaacaaccgacttgaataatgtactacaaacgagaactgaatggcttgcc
caaaccgaaagtttttcatcactgttgaacgatatgtcgtactcattgcaagcacacgaa
caacacgatgctgactgttactaa
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