Contarinia nasturtii (swede midge): 116337850
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Entry
116337850 CDS
T08003
Name
(RefSeq) sodium channel protein 60E isoform X1
KO
K21862
voltage-gated cation channel
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cns02000
]
116337850
Transporters [BR:
cns02000
]
Other transporters
Pores ion channels [TC:
1
]
116337850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
116337850
NCBI-ProteinID:
XP_031618643
LinkDB
All DBs
Position
Unknown
AA seq
2877 aa
AA seq
DB search
MTKNIHDKADNEQGAREQVVAYTEKSQVKHENRHIQLVREYGFHPRTKASVSDGAVLPRK
YEPFPGDMYGRPLEEIDTFIYEETFCVVSKRFKKNYIHRFTGTKSLFLFEPWSKTRRICV
YIATNQYFDYVVMATILLNCIFLAMTETVEEAEYIFLAIYSCEMVIKVIAKGFVLNKYTY
LRNPWNWLDFVVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFK
QLAEVMTLTIFCLMVFALFALQVYMGELRNKCVKNVPDGWNVTHEEWRMWINDTDNWIYD
EEDIDRPMLCGNLTGARHCPTGYTCLCVGNNPNHGYTNFDNFMWSMLTTFQLITLDYWEN
VYNMILATSGPMSVTFFTVVVFFGSFYLINLMLAVVALAYEEEAEITLEERKKDLLDHRD
DSTFSFDPSTLTVRKLNKNHKKKIDSRKGVLLASYSRKKTRKRKKGGKENDNNGNKQIQT
PQQPQQQSYEQQQQQQTQQQQSQEQEQQQHQQQPNTSRSITPSPNSNTKQIIARPQVLAV
QRTRGLPSSSTATAAAAAAAQVASNQNPNVLHPLGVNYRGQLLPTSRQASSNTSEGGGNR
ESSLDDSGVVDDHEEQDIESANLQTTDLQRDVTPLTTALSPRDIQIIKCNGNITKIRKDN
VCTYQPEYLSHIVMLDDLPDRNCGRCEQCCIDYDGWLQFQNCLYKIVKDPLFELGITLCI
VLNTLFLALEHHGMSEMNRRILDIGNKVFTSIFAFECIVKLMALSKDFFGCGWNIFDLIV
VSASICDIFLELLEGLSVLRGLRLLRVLKLAQSWTTMKVLLSIIISTIGALGNLTLILVI
VIYIFAVIGMQLFSKDYTPEKFFPDPVPRWNFNDFFHSFMMIFRILCGEWIEPLWDCMRA
EEKDGASTCFLIFLPTLVMGNFMVLNLFLALLLNSFNSEELKNRKEEVGDESRLARSFER
IRSIIRKQRLGRSQSSKMSEVVSEVIKREKKQKLRKQYPKTLYRRSYEESLKRPISGSDF
GYEIPLKDPRCLEAIMSKEELTAEQTTDIDADTPDVDKTKLKDTYVSIENERKLLQQMSS
GCGTQQNDSKDEPTYAESLELQVFSYPTQPNDGDPESFVLLPSSLKPDNLDADSLAKYSN
ERKASTPTICGSMENVSQIPKTLKLKENSNGVNKCRSYASPTSQCSKSDRKLSVSGSITH
NEFNIPRLMSDQSINSISNDHEVEVFSQQNLRDELLSCDKKELFQFLNDDFDNSHNYFSD
TVGYGSALIDPDTDSLMFDSKRDTTLFSPVRKASTASNKSNLSYISNSIFEALEQTRGGS
ISESIDRKSLRQIKAASETYQHCDELEPLVQDSEFENIIASFEKELSSIKNSTCSLQRQL
SAISRTPDTQAKGSFEKSSSTNTYEEILPMRQNNNSNQSTRDSVKLKRRSLEKQMKIDDD
FNVPHEIKKICDNMQAPFADSHMISKGIKVDLKQSNSYSGGSTDIIISPKPRRRSEFHNS
LDRIKRSSLIDRVDESLLEGDLNAVQHQEQQHLLYHTRSERLPRKYLNPDMNIESLSLKS
TGSYEHLVCHTENKETKKIRFQKSSEDNESSLTDKEKCDKNTSDAIDGDEHKDKQNAVAL
SDSDKPWHCLVSYVDDLTVGGRRNSKGLYDDPMLFPSFGKRKAPKVPDDCFPQKCYERCP
CWRTCCGAVCQERWCQMRTAVLSVVDTPAFEWFVLVLIFASSITLCFEDIYLDSNVMLKR
LLYWTNFIFSMIFVVEMVLKWMALGFTRYFTSFWTILDFIIVFVSVFSLLIEENENLKVL
RSLRTLRALRPLRAISRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGK
FFKCVDDEGVLLDVSIVKTRTECLHKNYTWINSRITFDHVGMGYLALLQVATFEGWMEVM
ADAVDCTGVDLQPQREANLYAYIYFVIFIVCGSFFTLNLFIGVIIDNFNMLKKKYEGGVL
EMFLTESQKHYYTAMKKLGRKKPQKVIKRPLNTFLAMFYDLSNSRRFEIAIFVLIFLNML
TMGIEHYDQPHAIFFILEVSNAFFTTVFGLEAIVKIVGLRYHYFTVPWNVFDFLLVLASI
FGILMEDVMIDLPISPTLLRVVRVFRIGRILRLIKAAKGIRKLLFALVVSLPALFNIGAL
LALITFIYAICGMSLFGHVRLQGALNDMVNFQTFGRSMTLLFRLMTSAGWNDVLESLMIQ
PPKCNPHFNNQTNGDCGHPLLAITYFTSFIIINYMIVINMYIAIILENFNQAHQEEEIGI
VEDDLEMFYIRWSKYDPHATQFIHFSQVSDFLASLDPPLGIPKPNTVALVSFNLPISSGN
KIHCLDILHALVKHVLGHVEETDNFKQLQEQMDVKFKKQFPTRKELEIVSSTRIWKREDK
AARTLQYAWREYLRLKKERERSPLSQEDEHTQTSSPGGWHSKLSALNFLHLQVHRRGTAT
SSRASSRKSSRASDASDLSELAGPWLNLPLMLVGGAGDMLKDMKPPEDDKNSDSGSRTPR
RKSFYNFFLRHQDAVDDSITSPSVNRKAVSPNASIGRPVSAADSFDEKQTQQQQQPQQQQ
QQQQQQLQTSAPIKTKRATSFVRKKPPFERGLSAQSALRINKNAHVVDGPSTTSSNTIKD
VSILVTEPSPDIPPASSISSLHVEPPSTLVHVLVHRESEEYQTDLEDSSSPDKDEQMKKP
QKSPTQTQLLASPGRAADDLDSVSNNESIVKIMVESPKEPPNVEFGVAFPQTAVVRYKTE
TTHEIEQTDGENSPTSVVTLVTDNIQEPIDVNIPRDTTNIFYAYEETEIDNSFQAQPAQL
ADSFSASIPETHDTIDTSNLLHNNQSVNDDTQAPTEMNTSDNQTANQISSDNSRSSS
NT seq
8634 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaatattcatgataaagcggacaatgaacaaggtgctcgggagcaagtggtg
gcatacaccgaaaaatcacaagtcaaacacgaaaatcgtcatattcaattggtgcgcgaa
tatggatttcatccgcgtacaaaagctagtgttagcgatggtgccgtattgccgagaaaa
tacgaaccatttccaggagatatgtatggccggccattagaagaaatagatacattcatt
tacgaagagacattttgtgtggtatcgaaacgtttcaaaaagaactacattcatagattt
actggtacaaaaagcttatttttatttgaaccatggagcaaaactcgtcgaatctgcgtt
tatatagcaacgaaccaatatttcgattacgttgtcatggcaacgatcctattgaattgt
atcttcttggcgatgacagagacagtggaagaggccgagtacatattcttggcaatttac
tcatgcgaaatggttatcaaagttattgccaaaggttttgttttgaataaatacacttat
ctacgtaatccatggaattggcttgactttgttgtgattacgagcggctatgcaacaata
ggcatggaagttggtaatttggctggccttcgaacctttcgtgtattaagagctctcaaa
acggtatccataatgccgggactcaaaaccatcatcaacgcgttgctacattcatttaaa
cagttggctgaagtcatgacactgacgatcttctgtctgatggtttttgcactctttgct
ctacaggtgtacatgggtgagctgagaaacaagtgtgtaaagaatgtgccagacggttgg
aatgtaacacacgaagaatggagaatgtggattaatgatacggataattggatatatgat
gaggaagacattgatagaccaatgttatgcggaaatttaacgggcgcacgacactgtcca
acaggctatacctgcttatgtgttggcaacaatccaaatcatgggtacacaaatttcgat
aatttcatgtggtcgatgttaacaacatttcaactaataactctggattattgggagaat
gtttataacatgattttagcgacgagcggaccgatgagtgttacctttttcactgttgtc
gtgtttttcggttcattttatttaatcaatctaatgctagccgtcgttgcgcttgcatat
gaagaggaagcggaaattacactcgaggaacggaaaaaagacttgctcgatcatcgggac
gattcaacgttcagcttcgatccttccacattaaccgttcgcaaattgaataagaaccat
aaaaagaaaatcgattctcgaaaaggtgttttgttggcctcttattctcgtaaaaaaacg
cgaaaacgaaaaaaaggtggaaaagaaaatgacaataatggaaacaaacaaattcagaca
ccacaacaaccacaacaacaatcgtatgaacagcagcagcaacagcaaacacagcaacag
caatcacaagaacaagaacaacaacaacatcaacaacaaccgaatacaagccgatcgata
acaccaagtcctaattcgaataccaaacagataatcgcacgaccgcaagtgttggctgta
cagcgaacccgaggtttaccatcgtcatcaacagcaactgcagcagcagccgcagcagca
caggtcgcttccaatcaaaatccgaatgtattacatccattaggagtcaattatcgtggc
cagttattgccaacaagtcgacaggctagctcaaacaccagcgaaggtggtggtaatcga
gaatcatctctcgatgattctggtgttgttgacgatcacgaagaacaagatattgaatca
gccaatttacaaacaaccgatttacaacgagatgtaacaccattaaccaccgcactatct
cctcgtgatattcaaatcataaagtgcaatggaaatataacgaaaattcgaaaagacaat
gtatgcacatatcagcctgaatatctatctcatatagttatgctagatgatcttcccgac
cgcaactgtggcagatgcgagcaatgttgcatcgactacgatggatggcttcaattccaa
aattgtttgtacaaaatagttaaggatccgctttttgaactgggtatcacattgtgtata
gttttgaatacactattcttagcgttagagcatcacggaatgagtgaaatgaatcgacgt
attctggatattggaaataaggttttcacatcgatttttgcatttgaatgcattgttaaa
ttaatggcactatccaaagatttctttgggtgtggatggaatattttcgatttgatagtt
gtttcagctagcatttgtgacatttttttggagctgctcgaaggtttgagcgttttacga
ggcttaagactgttacgggtgcttaagttagctcaatcatggacaactatgaaagtttta
ttgagtattattatttcaacaattggcgctctgggaaatcttacgttaatcttagttata
gtcatttatatatttgccgttattggaatgcaattgttttcgaaggactacacacctgaa
aagttttttccagatccagtgcctagatggaatttcaacgatttttttcactcgttcatg
atgatattccgaattttgtgcggtgaatggattgaaccactgtgggactgtatgcgggcc
gaggaaaaagatggggcatcaacgtgctttttgatttttcttccgacacttgttatggga
aactttatggttttaaatttgttcttggccttgttgcttaatagttttaattcggaagag
ttaaaaaatcgaaaagaggaggttggcgatgaatctcgtttggccagaagttttgagcgt
attcgttcgataatacgaaaacaacgcttaggccgtagccaaagttcaaagatgtcagag
gttgtgagtgaagtgattaaacgcgaaaagaaacaaaagcttcgcaaacaatatccgaag
acgctttatcgtcgaagttacgaggaatcattgaaacgtccaatttccggatctgatttt
ggctatgaaattccactgaaagatccacgttgtttagaagccataatgtcgaaagaagaa
ttgacggctgaacaaaccacagatattgatgccgatacacccgatgtggataagacaaag
ctgaaagatacgtacgtttcaattgaaaatgagagaaaattgttgcaacaaatgtcttcc
ggctgcggaacacagcaaaatgatagcaaagatgagccaacttatgctgaatcactggag
ctgcaggtgttcagttatcccacacagccaaatgatggcgatccagagtcatttgtattg
ttgccgagtagtttaaaaccggataatttagatgccgattcgttagcaaaatattcaaac
gaaagaaaagcaagcacaccaacgatatgtggatcaatggaaaatgtctctcaaatacca
aaaacattgaaattgaaagaaaattcaaatggtgtcaataaatgtcgaagttatgcaagc
ccaacatcgcaatgttcaaaatccgaccgaaaattgagtgtgagcggttcgataacacac
aacgaattcaatataccacgcttaatgagtgatcaatcaataaattccatttcaaatgat
cacgaggtggaagttttctcgcagcaaaatcttcgcgacgaattgctcagctgtgataaa
aaggagctctttcaatttctaaacgatgacttcgacaatagtcacaactatttcagcgac
acagttggttatggcagcgctttaatcgatccagacactgatagtttaatgttcgattcg
aaacgtgataccaccttattttcacccgttcgcaaagcatcgacagcaagcaataaatcg
aatttaagctacatttcaaattcgatatttgaagcgctggaacaaacacggggtggcagc
atcagtgaatcgatagatcgcaaatcgctacgacaaattaaagcagcatcagaaacgtat
cagcactgcgatgaattggaaccattggtgcaggactctgaatttgagaatataatcgcc
agttttgaaaaagaattgtcgagcattaaaaattcgacatgttcattgcaacgtcaatta
tctgcaatttctcgtacgccagatactcaggccaaaggatcatttgaaaaaagctcttcc
acaaatacatacgaagaaatacttccaatgcgacaaaacaacaatagcaatcaaagtaca
cgggacagtgttaaattgaagcgtcgcagtttagaaaaacaaatgaaaattgacgatgat
ttcaatgttccgcacgaaatcaagaagatttgtgataatatgcaggcaccgtttgccgat
tcgcatatgatatcaaaaggaataaaagtcgatctcaaacaaagtaacagttactcgggc
ggttcgacagatataatcatatcgccaaagccacgtagacgaagcgaatttcacaatagc
ctagatcgtataaaacggtcaagtcttattgatcgagtcgatgaatcattgctggaaggt
gatctgaatgcggttcaacatcaagaacaacaacatttgttgtatcacacacgtagcgaa
cgacttccaagaaaatatttaaatcctgatatgaacatagagagtttatcgttgaaaagt
acaggcagctatgaacatttggtttgtcacaccgaaaataaagagacgaaaaagattcga
ttccagaaaagttcggaagataatgaatcatcgttgacagacaaagaaaaatgcgataaa
aatacaagtgatgctattgatggtgatgagcacaaagataaacaaaatgctgtagcactt
tcagattcagataaaccatggcattgccttgtttcttatgtagatgatttaactgtaggt
ggaagacgtaattcaaaagggctatacgatgatccaatgctatttccaagctttggaaaa
cgtaaagctccaaaggtacctgatgattgtttcccacaaaagtgctacgaaagatgtcca
tgttggagaacttgttgtggtgctgtctgtcaagaaagatggtgtcaaatgcgaacggca
gttttatcagttgttgatacacctgcattcgaatggtttgttctcgtattgatatttgcc
tcaagcataacgctttgctttgaggatatttatctggattcaaatgtaatgctgaagcgg
ctactgtactggacgaattttatattcagcatgatatttgtggttgaaatggtactgaag
tggatggcattaggtttcacacgatatttcaccagcttttggaccattctcgattttatc
attgtatttgtgtcagtattttctctgctcattgaagaaaatgaaaatttgaaagtgttg
cggtcattgagaacattgcgcgctttgcgtccgcttcgggccatttcacgatggcaagga
atgcgaatcgttgttaatgcactgatgtatgccattccatccattttcaatgtactgctg
gtgtgcctagtattttggttgattttctcaattatgggcgtacaattttttggcgggaaa
ttttttaaatgcgtcgatgatgaaggtgtcttgcttgacgtttcgattgtgaaaacgcgt
acagaatgtttacacaagaattacacgtggatcaattcaagaataacatttgatcatgtt
ggtatgggctatttagcccttttacaagtagcaacattcgaaggatggatggaggtgatg
gctgatgctgtcgattgtaccggagttgatttgcaaccgcaacgtgaggctaatctttac
gcttacatatatttcgtgattttcattgtgtgcggttcgttcttcactttaaatctattc
atcggtgttattatcgacaattttaatatgctcaagaaaaagtatgaaggtggcgttctc
gagatgtttttaactgaatcacagaagcactattacaccgccatgaaaaaattgggtcga
aaaaagccacaaaaagtgattaaacgtcctttgaatacgtttctcgcaatgttttacgat
ctttccaattcaagaagattcgaaatcgcaatatttgttctcatttttttaaatatgctg
actatgggaatcgaacattacgaccagccgcatgccatattctttatattagaagtgagc
aacgcgttttttaccacggtattcggtttagaggcaatcgtgaaaattgtcggcctaaga
tatcactatttcaccgttccatggaatgtttttgactttctacttgtgctcgcatcgatt
ttcggcattctaatggaagacgttatgattgatttgccaatatcaccgaccctattgcgc
gttgttcgtgtctttcgcattggacgaattcttcgattgattaaagcggcaaagggaata
cgaaagttattgtttgcattggttgtatcattgccagctctattcaatattggcgcatta
ttggcattgataacatttatttatgcaatttgtggaatgtcattgtttggtcatgttcgt
ctgcaaggcgccctcaacgatatggtcaacttccaaacatttggccgaagtatgacgctg
ttattccgtctgatgacatcggccggatggaatgatgtcttagaatcacttatgattcaa
ccgccaaaatgtaatccacatttcaataatcaaacgaatggcgattgtggtcatccgctt
ttggcaatcacatactttaccagctttatcatcatcaattatatgattgtcattaatatg
tatattgcaatcattttggagaactttaatcaggcgcatcaggaagaggaaattggtatt
gttgaagacgatttagaaatgttctacattcgatggtccaaatacgatccgcatgccaca
caattcattcatttctctcaagtatcggatttccttgcatcgttggatccaccattgggc
attccaaaaccgaatacagtcgccttggtatcattcaatttgccaatttcgtcgggcaat
aagattcattgcttggatattttgcatgcgttagtgaaacatgttttgggtcatgtcgaa
gaaactgataacttcaaacaattacaggaacaaatggatgttaaattcaagaaacaattt
ccaactcgtaaagaactagaaattgtttcgtcgactcgtatttggaagcgagaggataaa
gctgctagaaccttacaatacgcttggagagaatatttgagattgaagaaagaacgtgaa
cgttcaccattgtcacaagaagacgagcatactcaaacgtctagcccaggcggttggcat
agtaaattgtcagcattgaatttcttgcatttgcaagttcatcgccgtggtacagcaaca
tcaagccgagcatcttctcgcaaatcatccagagcatcagatgcatccgatttgagtgaa
ttggctggaccatggcttaatttacctcttatgcttgtcggtggtgccggtgacatgctc
aaagacatgaaaccaccagaagatgataaaaactctgattcaggatcacgaacacctcgc
cgaaaaagtttctataacttctttttacgacatcaagatgcagtggacgattctataaca
tcgccgtcagtaaatagaaaagccgttagtccaaatgcatcgattggccgaccagtgtct
gctgccgattcatttgacgaaaaacaaacgcaacagcaacaacagccccagcagcagcag
caacaacaacagcaacaattacaaacatcagccccgataaagacaaaacgtgccaccagt
tttgtacgtaaaaagccaccatttgaacgcggtttgtccgcacaaagtgccctccgaata
aataagaatgctcatgttgttgatggtccttcaaccacatcttcgaacaccatcaaagat
gtgagcattttggttacagaaccatctcctgacattccaccagcatcatcaataagtagt
cttcatgtagaaccacctagtacgttggttcatgttttagtgcacagagaaagtgaagaa
tatcaaaccgatttggaagatagtagtagtccagacaaagatgaacaaatgaaaaagccc
caaaaatccccgacacagacgcaattgcttgcatcgcccggtagagcagcagacgatttg
gattcggtcagtaataatgagagcattgtcaaaataatggtcgaaagtccaaaagaaccg
ccaaatgtggaatttggagttgcctttcctcaaacagcagtcgtccgatataagactgaa
acaacacatgaaatagaacaaactgatggtgaaaattcaccgacatcagttgtcacattg
gtaacggataatatacaagagccaattgatgtaaatattccccgtgacaccacaaacatt
ttctatgcatacgaagaaacggaaatagacaatagttttcaagcacagccagctcaatta
gctgattcgttcagtgcttcaattccagaaacccatgacacaatcgatacatctaatcta
ctccacaataatcaatcagttaacgatgacacacaagctccaacagaaatgaatacatcc
gataatcaaacagcaaaccagatcagtagtgataattctagatcaagtagctga
DBGET
integrated database retrieval system
