Contarinia nasturtii (swede midge): 116337884
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Entry
116337884 CDS
T08003
Name
(RefSeq) vacuolar protein sorting-associated protein 26B-like isoform X1
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116337884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116337884
Membrane trafficking [BR:
cns04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
116337884
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps26
Arrestin_C
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
116337884
NCBI-ProteinID:
XP_031618684
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MNFLGFGQSADIDIVFDDSESRKLAEVKTEDGKKEKYLLYYDGETVSGKVNVTLKKPGSK
LEHQGIKVELIGQIELYYDRGNHHEFVSMVKELARPGDLIQNTSYPFEFANVEKPYEVYV
GSNVRLRYFLRVTIVRRISDVVREIDIAVHTLCSYPEMNCPIKMEVGIEDCLHIEFEYNK
SKYHLKDVIVGKIYFLLVRIKIKHMEIAIIKRETTGSGPVNVFTENETIAKYEIMDGAPV
KGESIPIRVFLAGYDLTPTMRDINKKFSVRYFLNLVLMDTEDRRYFKQQEITLWRKSDKN
RKSAITQSTNPHVPSHLVGSDGEIMVKPQAPISSMSSNTHVNSDGENSSIRDDNMSGEAG
EKTVGLFQEESPDHVDTSFHTEAQSNLPLSSEDVAVSPNLCESAANTTTSLQVEENVPQQ
RESGDGASANPTESETSSANQIRTKSRTGSLFDDDEDDEMENANQPAMAN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccttggatttggacagtcggccgatattgatatcgtgtttgatgacagtgaa
tcacgtaaactggccgaagttaaaacagaagatggcaaaaaagaaaaatatcttctgtac
tatgatggggaaactgtatcgggaaaagtcaatgtaacattgaagaagcccggtagcaaa
ttggagcaccaaggcatcaaagtggaactaattggtcaaattgagttatactatgatcgt
ggaaatcaccacgagttcgtttcaatggtcaaagagcttgcaagacctggcgatttgatt
caaaataccagctatccatttgaatttgcaaatgttgaaaagccatacgaagtatacgtt
ggatctaacgttcgattacgatatttcctacgtgtgacgattgttcgacgcattagcgac
gttgttcgcgaaatcgatatcgccgttcacacgttatgtagttatccggaaatgaattgt
cccatcaaaatggaagttggtatcgaagactgtttacatatagaatttgagtacaataaa
tcaaagtatcatttaaaagatgttattgttgggaaaatatattttttacttgttcgcatt
aaaataaaacatatggaaattgcaataataaaacgtgaaacaactggatcgggtcctgtg
aatgtattcacagaaaatgaaacgatagcaaaatacgaaattatggatggtgccccagtg
aaaggtgaaagtataccaattcgtgtgtttttggcgggttacgatttgacgcctactatg
cgtgacattaacaagaaattttccgttcgatattttttgaatctggttctaatggatacc
gaggaccgacgatattttaagcagcaagagataacattgtggcgtaaatcggataaaaat
cgaaaatcagccataacacaatcgactaatccgcatgtaccttcgcatttagttggttct
gatggcgaaataatggttaaaccgcaagcaccaatatccagcatgtcatcaaacactcat
gttaatagcgatggcgaaaacagcagtatccgtgatgacaatatgagtggtgaggctggt
gaaaaaacagttggtttattccaagaagagagcccagatcatgttgatacttcatttcat
acagaagctcaatcaaatttgccgttgtcctcagaggatgtcgctgtatctccaaatctg
tgtgagagtgctgcaaataccactacttctttgcaagtcgaagagaatgtgccacagcag
cgggaatcgggtgatggcgcttcagccaatccaacagaaagtgaaaccagtagtgcaaac
cagataagaacaaaatcacgtactggatcattatttgacgatgacgaagatgacgaaatg
gaaaatgctaaccaaccagcaatggcaaattag
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