Contarinia nasturtii (swede midge): 116337888
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Entry
116337888 CDS
T08003
Name
(RefSeq) UV excision repair protein RAD23 homolog A
KO
K10839
UV excision repair protein RAD23
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03420
Nucleotide excision repair
cns04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116337888
09124 Replication and repair
03420 Nucleotide excision repair
116337888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cns03051
]
116337888
03400 DNA repair and recombination proteins [BR:
cns03400
]
116337888
Proteasome [BR:
cns03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
116337888
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116337888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Dsc3_N
Crinkler
CUE
DUF1776
GIP1_N
UBA_2
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
116337888
NCBI-ProteinID:
XP_031618690
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MLITIKNLQQQTFHVEFDPSETVLKLKQKIEAERGKDYQTESQKLIYAGMILADEKTIAS
YNFDEKKFIVVMVNKSAKKDTKLEEEAASTTITSTSSTTKTEEAGSTNIKAATNVESKSE
PAKTDESVPSESTPAVTAQQQSVQSAAESALITSGDEYNSMITNIMEMGYTRDEVERALR
ASFNNPDRAVEYLLSGIPDSGNLEELNNPVGSAAGGGLVDDGASNINIPPTSEGNADPLS
FLRSQPQFHQMRNLIHQNPELLNAALQQIGQTNPALLQLISENQESFLNMLNEPNADELN
VDVANSGVGGLSASTGDVAGEQRPSDATLLLTAQDRDAIERLKGLGFPEHLVLQAYFACE
KNENLAANFLLSSNMDD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcacaatcaaaaatttacaacagcaaacttttcacgtggagttcgatccatcg
gaaacggttttgaaactgaagcaaaagatcgaagccgaacgtggcaaggactatcaaaca
gaaagccaaaaacttatttatgcaggtatgatattagctgatgaaaaaaccattgcatca
tacaatttcgatgaaaaaaagtttattgttgttatggtaaataaaagtgcaaagaaagac
acgaaattggaagaagaagcagcatctacaacgatcacctctacatcatcgaccacaaaa
accgaagaggccggttcaacaaatataaaagcagccacgaacgttgaatcgaaatcggaa
cctgcgaaaacagatgagtctgtacccagtgaaagtacacccgctgtaacagcacaacag
caatcagtgcaatcagcggccgaatcagcacttataacttcaggtgatgaatataatagc
atgataacaaacattatggaaatgggttataccagagacgaggtggaacgagcgttacgc
gccagtttcaacaacccagatcgtgctgttgaatatttgctaagcggaataccagacagt
ggcaatttggaagagttgaataatccagttggtagtgcagctggtggtggacttgttgac
gatggtgctagtaatatcaatattccgcccacatccgaaggtaatgcagatccattgtca
tttctacgtagtcaacctcaattccatcaaatgcgaaatttaatccatcaaaatcccgaa
ttgttaaatgctgcattgcaacagattggtcaaacaaatccggctttactacaattgata
tcggaaaatcaagaatccttcctgaatatgttgaacgaaccaaatgccgatgaattgaac
gttgatgtagctaatagtggtgttggtggactttccgcatcgactggagacgttgctgga
gaacaacggccatctgatgcaacacttcttttaacagcgcaagatcgtgacgctattgaa
cgtctcaagggacttggattcccagaacatttggtattgcaagcctattttgcatgtgag
aaaaacgaaaacttagccgcaaattttttgttgtcatcaaacatggatgattaa
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