Contarinia nasturtii (swede midge): 116337990
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Entry
116337990 CDS
T08003
Name
(RefSeq) homeotic protein Sex combs reduced
KO
K09305
homeobox protein HoxA/B/C5
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116337990
Transcription factors [BR:
cns03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
116337990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116337990
NCBI-ProteinID:
XP_031618859
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MNPENFAMSSYQFVNSLASCYPQSQLGQHGGNNTSNNTSTSSGNNQASANNDYFPPSAYT
PNLYSNTPQAHYANQAYNLGGQQNPNDMVDYTQLQPQPQRLMLPNQQQQPAMNPNSCKYD
PDAVKISATNNNNNNNNTTSLISSPQDLTTGRDISPKLSPTVVENVARSLNKNSGGGAGG
GGNVSSTNQNNPLGLNNNNNNVNHTNVPMSMHSPNGGDSDTDSESGNEAGGSQNGSGKKG
TPPQIYPWMKRVHIGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAH
ALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMSPYGHPYQFDIHPSQFAHLSA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagagaattttgcaatgtcttcatatcaatttgtcaattcgttggcatcttgt
tatccacaatcgcaactaggacaacacggtggaaataatacaagtaacaatacatctacc
tcatcgggcaataatcaggcatcagcaaataatgattattttccaccatcggcctatacg
ccaaatttatattcgaatacaccgcaagcgcactatgcaaatcaagcgtacaatttgggt
ggacaacaaaatccaaatgatatggtcgactatacacaattgcaaccacaaccacaacga
ttaatgctgccgaatcaacagcaacagcctgcaatgaatccaaatagttgtaaatatgat
ccggacgcggttaaaatcagtgcaacaaacaacaataataacaataataatacaacatcg
ctcatatcaagtccacaagatttgacaactggacgtgatatttcaccgaaattatcgccg
acggttgttgaaaatgtggcccgttcgctgaacaagaatagcggcggtggtgcaggcggt
ggcggcaatgtctcatcaacaaatcaaaacaatccattaggtttaaacaacaataataat
aatgtgaatcatacaaatgtaccgatgtcaatgcacagcccaaatggcggcgactcggac
acggacagtgaaagcggcaacgaagcaggtggcagtcaaaatggatcaggcaaaaaaggt
acaccaccacaaatctatccgtggatgaaacgcgtacatatcggcacaagtacagtaaat
gcaaatggtgaaacaaaacggcaacgaacatcgtatacgcgctatcaaacgctcgaattg
gaaaaggaatttcatttcaatcgttacctgacccgtcgacgacgcatcgaaatcgcccat
gccctgtgtctcaccgagcgtcaaattaaaatttggtttcagaatcgtcgcatgaaatgg
aaaaaagagcataaaatggcatcgatgaacattgtaccttatcatatgtcaccgtacggt
catccataccaattcgatattcatccgtcacaatttgctcatttgagcgcatag
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