Contarinia nasturtii (swede midge): 116338002
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Entry
116338002 CDS
T08003
Name
(RefSeq) serine-arginine protein 55 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116338002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116338002
Spliceosome [BR:
cns03041
]
Common components
Common spliceosomal components
SR proteins
116338002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
SET_assoc
RRM_7
OB_RNB
Motif
Other DBs
NCBI-GeneID:
116338002
NCBI-ProteinID:
XP_031618879
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MVGSRVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYRDADDAVYELNGK
ELLGERVVVEPARGQARGSHRDRYNDSDRYSSRRGGGRYNNDKSKNSRSSSRYGPPLRTE
YRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDT
ELNGRRVRLVEDRRGGRGGRGGRSRSSSRSSRSRSRSRSRRRRSSSRSRSPRSRSKSRGG
RSKSKSPKSRSRSKSNNRDLSKSKSKSRSRSRSRDSRSRSKSHKRGDSRDSRDRSLSKGS
KDRHHSRSSSPKNNGGSGGSPDRNESMDD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggttggttcaagagtatatgttggtggattaccgtatggcgtccgagaacgtgacttg
gaacgatttttcaaaggttatggacgaacccgtgacattttaattaaaaatggatatggt
tttgtggaattcgaagattatcgtgacgcagacgatgccgtttatgaattgaatggaaaa
gaattactgggagaaagggtggttgttgagccggctcgtggccaagccaggggaagtcac
agagataggtacaatgatagcgatcgttatagcagccgtcgtggtggaggtcgttacaat
aacgataaatcaaaaaattccaggagttcatcacgttatggtccaccattgcgcacggaa
taccgtttaattgtggagaatttgtcaagccgcgttagctggcaggatcttaaagattac
atgcgtcaagctggtgaagttacgtatgctgatgcacacaaacaacgtcgtaacgaaggt
gtcgttgaattcgcatctttgtcagatatgaaaaccgccatcgagaaactcgatgacact
gaattaaatggtcgtcgagttcgtttggttgaagatcgtcgtggaggacgtggcggtcgt
ggaggaagatctcgttcatcaagccgatcaagccgcagccgtagccgttcacgatctcgt
cgtcgccgatcatcaagccgctcacgtagtcctcgcagccgaagcaagtctcgtggtgga
cgctccaaatcaaaatcaccaaagagtcgcagccgctcaaagtcaaacaaccgtgatttg
tccaaatcgaaatcaaagagccgcagccgtagccgtagccgtgactcacgctcccgttcc
aagtcacacaagcgtggtgattcccgcgactcgcgcgatcgttcattgtcgaagggttct
aaagacagacaccattccagatcaagctcgccgaaaaacaacggaggttcaggtggatca
ccagacagaaacgaaagcatggatgattaa
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