Contarinia nasturtii (swede midge): 116338060
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Entry
116338060 CDS
T08003
Name
(RefSeq) RNA-binding protein 5-like
KO
K13094
RNA-binding protein 5/10
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116338060
Spliceosome [BR:
cns03041
]
Complex A
Other components
Complex A specific factors
116338060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
G-patch
OCRE
G-patch_2
RRM_1
Zn_ribbon_RanBP
OTT_1508_deam
TIR_3
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
116338060
NCBI-ProteinID:
XP_031618971
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MDRHSRSPDQLDGRRYGRRRRHSRSRSRSRDRRRRYSRSLSRERIYRRGPPSPDSYRDNC
DQNYDDRDRYNRRDRRDRDRYNFRGRASSESSNDSYSNEHVNYRNQTPSNKIIVLGLAKH
LTEADINADLHMCGIQPQSIRLIRKRKTGTSRGFAFVEFNTEEEATRWMEYKQGVLMIQD
QYRAIMQYSVSKESSGHDKILTDWYCAKCGVFNFKRRDNCFKCSASREESEKGGEGSDEV
SNILTKKIMLRNLDVLTNEEGVLTSMQDVIPTLVSKISKILICRDPLTSTSRGICYLFFD
NLVDSMNTHNALKSLEPPLNIDNREIIITYCVDSDNRQIHSRQNSGKSHLDSMQSSKSQY
TLADVPRLAEYSASVYAKNAAEQEHYYKYYTDYYTEQINSGQYSNIPTISQIGETANSGA
AVALSAIQRKQHKQYEKISQAQSVAAAALQIPNGQDNRKYPTPDSTQYQYDDTSGYYYDP
TTGLYYDANSQYYYNSEIAKYLYWDQDSQTYVLASQSDAGANNTDSMSACYGDKSALNST
TAAVASSNGSNAQATDGNEDNSKDSDSKRNDPKQDKVKVAKKIVKDMERWAKQLNQKKEN
AFQPMQAIEEPIVQPSSSRQAPLQRIGNGYADVGFTIMENRETRMKPSLDAGAGKALNKL
LPYASDSDNEADQSGPNGNGGSLSEKDLVDFSKLTCLLCKRAFQSLEILNKHLKMSNLHK
ENLQKLNLNAQNERASGNGMAYRDRAKERRLKYGEVDPPPPNRSRERFEKEIRKQTAQMQ
KQTTSNLANVPIDQSNVGNRLLQKMGWSEGQGLGKSNQGRTNIIEAESRARSAGLGSKST
SFVPGDDYRSYIKRMMKQRYEQSD
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggatcgacattcgcgaagcccggaccaattagatggtaggcgttatggtcgccgcaga
agacatagtcgttcaagatctagatcacgtgatcgacgtagacgatacagtcgttcatta
agtagagagagaatttatcgtcgaggtcctccaagtccagattcgtatcgtgacaattgt
gatcaaaattacgatgatagagatagatacaataggcgtgatcgcagagacagagatcga
tacaattttcgtggaagagcttcatcggaatcaagcaacgacagctatagcaatgagcat
gtcaattatcgtaatcaaacgcccagcaacaaaatcatcgttcttggtcttgccaaacac
ctgactgaagcggatattaatgcggatcttcatatgtgtggcattcaacctcagtcgatt
cgtctgattcgaaaacgaaagacaggtacatcacgtggttttgcttttgtggagtttaat
actgaagaggaagcaactcgctggatggaatataaacagggtgtgctcatgattcaagat
caataccgtgccattatgcagtacagtgtgtctaaggaatcgagcggtcatgataaaatc
ctaaccgattggtattgtgcaaaatgtggtgtcttcaatttcaagcgtcgtgataattgc
ttcaaatgtagcgcatcgcgggaagaaagcgaaaaaggtggcgagggaagcgatgaagtt
agcaatattttgacgaaaaaaatcatgctacgaaatctggatgtattaacaaatgaggaa
ggagtattaacctcaatgcaagatgtcattccgacgcttgtttcaaaaatttccaagata
ctcatctgtcgtgacccgctcacatccacatctcgcggaatttgttatttatttttcgat
aatcttgtcgattcgatgaatacgcataacgcattaaagtcacttgagcctccattgaat
attgacaatcgagagattatcataacgtactgtgttgattccgataatcgacaaattcat
tcgcgccaaaacagtggcaaatcccatctggattcgatgcaaagtagcaaatcgcagtat
actttagccgatgtaccacgtttggccgaatacagtgcttcggtttatgctaaaaatgct
gccgaacaggaacactattataaatactatacggactattacacggagcagataaatagc
gggcaatatagcaacataccgacaataagtcaaatcggggagacagccaattcaggagcg
gctgttgcactgtcagccattcaacggaaacaacacaaacagtacgagaaaatttctcaa
gcgcaatctgttgccgccgccgcactacaaataccaaatggacaggataatcggaaatat
ccaactccggacagtacacagtaccaatacgatgacacatctggctattattacgatcca
acaactggtttatactatgatgccaattcacaatattattacaatagtgaaattgcaaag
tatctctactgggatcaagattcacagacctatgtgctagcatcacaatcggatgccgga
gcgaataatacggattcaatgtccgcatgttatggtgataaaagtgctttaaatagtaca
acggcagcagtcgcatcatcaaatggatcaaatgctcaagcgacagatggaaatgaagac
aatagcaaagacagcgatagcaaacggaacgatccaaaacaagacaaagtgaaagtggca
aagaaaattgtaaaagacatggaacgatgggcaaaacaattgaatcaaaagaaagagaat
gcatttcagccgatgcaagctattgaagagccaatcgttcaaccatcgagtagtcgtcaa
gcaccgttgcaacgaattggaaatggttatgccgatgttggttttacaataatggaaaat
cgtgaaacacgcatgaaaccttcgttggatgccggtgccggtaaagcactcaataaatta
ctgccgtatgcctctgattcggataatgaagcggatcaaagtggaccaaatggaaatggt
ggatctcttagcgaaaaggacttagttgatttttccaaattgacgtgtttgttgtgtaaa
cgcgcattccagtctctagagattctgaacaagcatctgaaaatgtcaaatttgcacaaa
gaaaatctacaaaagctcaatttaaatgcacaaaatgaacgtgcaagcggaaatggcatg
gcgtacagagacagagctaaagaacgccgtctgaaatacggcgaggtggatcctccacca
cctaatcgatctcgcgaacgatttgaaaaagaaatacgaaaacaaacggctcaaatgcaa
aagcaaaccacttccaatctggcgaatgtgcctattgatcagtcgaatgttggtaataga
ctgcttcagaaaatgggatggtcagagggtcaaggactgggaaagagtaatcaaggaaga
acaaacattattgaagcggaaagtagagcacgcagcgctggattgggctctaaatcaaca
agtttcgtgcctggcgatgattatcggtcttatattaaacgaatgatgaaacaaagatac
gagcaaagcgactag
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