Contarinia nasturtii (swede midge): 116338063
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Entry
116338063 CDS
T08003
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116338063
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116338063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFF4_CHD
AT_hook
Motif
Other DBs
NCBI-GeneID:
116338063
NCBI-ProteinID:
XP_031618974
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MYSTGNNDDLKRISRMEEAERKERRERDKRERAKMSLTQNPEPEPVMPSCLFQAPCFRRT
SPTEKERQIQSKLGDFQSVKHLIDGDNMLLVGVSSSQIHRSQQPSFPPQAPPVLNQPKSQ
SQLQPQIPPSQNRNSVKQVKQHMNGLSNSPQQQQAAMPQQQAKPSQLPNGIRSNYKYSSQ
MPSNLGMPNGRHHTQMDRINDKIQDCNEKNADLFDKGFQAPTFAKPFKVPMNHDQAHLKT
RSVSNRIETPSTPTEGGIEMDVHNILKIMKNPKMEPLTEIAATPRTEIEVQQPNKSHVYA
NIPPFFHSLHNSSSTPLAPLAPLTSPMAPLAPLAPLAPLTPLAPLAPLAPLNPMPSSSLM
TPIADIDENKTHLKSIDSLPEHDGIPNKSTELEHDLDLSESDDNEGENIESKQQPNKTNA
NDDNSTESGSEGSSSMDSSSDDDGSKNEPDTERDKWSLANFAKPDPKPDPKPIEKQPSHI
VPQVKTEVTGDLSNNLNAAESAKKKSFISPKCFTNEQIKQEPMDDEKVEKALNKKKPQTR
QKRQTVAEKSTLSESSDNENGKSTGTKTRRSRSKSTEVKRNRGRPRKNPTTPTTSENVQQ
KSAIESKIMSPTLRTTPKKETAANAKRAQSNARAKTKKQSANIKSRPIVSTDPSSSDEET
DRKKTVNKIASPATKENPIRHGSERLLSPIQLRNSISPRGKSTVLKKVASSSEEDDDDDD
DDEEEEQESKAKRRKRNVPKENHSHYSSSGESEESIKNNKKVNKPAKSEIKSSIVRNIFR
MTKNDGGAKGKGQVLIVGQSEDVPKAVPIAQRNCSTAPTTNINNNKLLPSSIVCKIDIKR
LDLIRLSRVSGDQNCRSSNNNKSPMDANTKLKGGRRRPQNGGRWTSPRDTSSSSENSSDD
DSADPEAINETNRNGGSNYDLKANSKLNSINDQKLTRNIPDIHNSAYNTIIHTNLSDCRA
DNTDLHAIRNNTAFSRSPKLEEKQLNKIKREGLKAEFSASEFNACNRAIKSPKVFIDDKS
LDKLGYNCDGKNANVNIKKEYDKIKLENGNDDGNKLMSGDDIVTNNRKKRASSANSSPYK
DKKRKKLFDDSTIDQHHLAPTNHDRTNSSILPPPPQKPIVTKVYYSYFERTNDDRDEREL
KDHHRSLSEAKRLKHAADAETDHLSQAMLYLEAAVYFLLTSVAMERDPLTEKAAFTMYND
TLSLIKYVSELNEYISSKFRNQQQHPSRQGSIHSKVAILSLRCQSLTHLKLYKMRRHEVK
ECQKTISEYLTKSGFSEVPNGNTPSPLSPTNSVGSQGSGSNTPPCSLVPIQVHNAFQRQD
KFFNRLVMCHDLWELADATVLKGNHTEFFVELDHDNGPITLHSSLSKVVKYVHAGLKKLK
QL
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgtattccactggcaacaatgatgatctaaaaaggatcagtagaatggaagaagccgaa
cgaaaggaaagacgtgaaagggacaaacgtgaacgtgcgaaaatgtcgttaacacaaaat
ccagagcctgaaccagtgatgccgtcgtgcttatttcaagcaccttgttttcgtagaacc
agtccaacggagaaggagcgacaaatacaatcgaaattgggtgatttccaaagtgtgaaa
catcttattgatggcgataatatgctattggttggtgttagctcatcacaaattcatcgt
tcacagcagccttcttttccaccgcaagcaccaccggtcctaaatcagccaaaatctcag
tcacagcttcaaccacaaattccaccatcacaaaatcgtaacagtgttaaacaggtgaaa
caacatatgaatggattatcgaattctcctcagcaacaacaagctgcaatgcctcaacaa
caagcgaaaccatcacaattaccaaacggaataaggtcaaattacaaatattcttcacaa
atgccgagcaatttaggaatgccaaatggacgacatcacacacaaatggaccgaataaat
gataagattcaagattgtaacgagaagaatgcggatctctttgataaaggattccaagcg
cccacctttgcaaaaccattcaaagttcccatgaatcatgaccaagcgcatttaaaaacg
agatccgtttcaaatcgcattgaaacaccgtcaacgccgacagaaggtggcatcgaaatg
gatgttcacaatatattgaagattatgaagaatccaaaaatggaaccattgaccgaaatt
gctgctacaccaagaactgaaattgaagtacagcaaccaaataagtctcatgtttatgca
aacataccgccttttttccattccttacacaatagttcatcaactccgttagcaccactt
gctccgttgacatcgccaatggctccattggcaccgttggcacctttggcaccattaact
ccattagctccattggcaccattggctccgttgaatccaatgccatcatcatcacttatg
acaccaatagctgacatagatgagaacaaaacacatttaaagtcgattgattcacttcca
gagcacgatggaattcccaacaaatcaacggaacttgaacacgatttggatttatcagaa
agcgatgacaatgaaggcgaaaatattgaaagcaaacaacagccaaataaaacgaatgct
aatgatgacaattcaacagagagtggttccgaaggatctagttcaatggattcgtcaagt
gatgatgatggttcgaaaaatgaaccagatactgaaagagacaaatggagcttggcaaat
tttgcaaaaccagatccaaaaccagatccaaaaccaatcgagaaacaaccatcgcatata
gtgcctcaagttaaaacggaagtgacaggagacttatcgaataatttgaatgccgctgaa
tcagctaaaaagaagtcatttatatcaccaaagtgctttaccaatgaacaaatcaaacaa
gaaccaatggatgatgaaaaagttgagaaagctttaaataagaaaaaaccacaaacacgg
caaaaacgacaaaccgttgcggaaaagtcaacgctaagtgaaagtagcgacaatgaaaat
gggaaaagtacgggtacaaaaacgagaagaagtcgatcaaagtcaactgaagtgaagcga
aatcgtggccgaccaagaaaaaatccaacaacaccaaccacctcagagaatgtacagcaa
aagagtgcgattgaatcgaaaataatgtcaccaacactccgaacaacaccaaaaaaagaa
acggcagcaaatgcaaaacgtgcacagagcaatgctcgtgcgaaaactaagaaacaaagt
gcaaatataaaaagtcgtccgattgtatcaactgatccatcctcaagtgatgaagagact
gaccgcaagaaaaccgtcaacaaaattgcatcaccggccaccaaagaaaatcccatacgc
catgggtccgaaagacttttatctcccattcaattaagaaattcaatatctcctcgtggt
aaatcaacggttcttaaaaaagtggcgagctcgagtgaagaagatgacgatgatgacgat
gatgatgaagaagaagaacaagaatcaaaggcaaaacgccgaaaacgaaatgtaccaaaa
gaaaatcattcgcattactcatcgtcgggcgaaagtgaagagagtattaaaaataataaa
aaagtgaacaaaccagcgaaaagtgaaataaagagtagtattgtgcgaaatatatttcga
atgacaaagaatgatggcggtgccaaaggaaagggtcaagtgttgatcgttggacaatca
gaagatgtgcccaaggcagtaccaattgctcagcgtaattgtagcacggcaccaacgaca
aacatcaacaacaataaacttttaccaagttcaatcgtttgcaaaatcgatatcaaacgc
ttagatctcatacgattaagtcgggtttcaggtgatcaaaattgtcgttcgagcaacaat
aacaagagtccaatggatgccaatacgaaattgaagggaggacgacgaagacctcaaaat
ggtggtcgctggaccagtccacgtgacacaagttcaagcagtgaaaacagtagcgatgac
gatagtgcggatccagaagcaatcaatgaaacaaatcgaaatggtggatcaaactacgat
cttaaagctaattcaaagcttaattcaatcaacgatcaaaaacttactcgcaacatacca
gacattcacaattctgcgtataataccataatccatacaaatctaagcgactgtcgtgct
gataataccgatctacatgcgatacgaaacaataccgcattctcacgttcaccgaaatta
gaagagaagcaattaaataagataaaacgtgaaggtctaaaagctgaattttcagcatcg
gaatttaatgcctgtaatcgggcaataaaatcaccaaaagtgtttatcgatgataaatcg
ctcgataaactgggttacaactgtgatggaaaaaatgcgaatgtcaatatcaaaaaagaa
tacgataaaattaaattagaaaatggcaacgatgatggcaacaaattaatgagcggcgat
gacatagtaacaaacaatcgaaagaagcgagcgtctagcgcgaatagtagtccgtacaag
gataaaaagaggaaaaagttgtttgatgactcaacaatagatcaacatcatttagcacca
acaaatcatgatagaacgaattctagtatcttaccacctccaccacaaaaaccaattgtt
acaaaggtatattattcctattttgagcgtacaaacgacgatagggacgaaagagaattg
aaagatcatcatcgatcgttatcagaggcaaagagactgaaacatgcagcagatgctgaa
acggaccatttgtcccaagctatgttatacttagaagcagctgtatattttttgttaacc
agtgttgcaatggaacgggatccgcttacagagaaggcagcatttacgatgtacaacgac
actcttagtttaataaagtatgtatcagaactaaacgaatatatctcttcaaagtttcga
aaccaacaacagcatccttctcgtcaaggaagcattcatagtaaagtagcaattttaagt
ttaagatgccaatcgttaacacatttaaaactgtacaaaatgcgaagacatgaagttaaa
gaatgccaaaaaacaatatcagaatatttaacgaaaagtggcttttccgaagtgccaaat
ggtaatacgccatcaccattatcaccaacgaattcagttggttcacagggttcgggttca
aatacgccgccttgttcattagttccaattcaagtccataatgcgtttcagcgacaagat
aagttctttaaccgtttggttatgtgtcatgatttatgggaattggccgatgcgaccgtt
ctcaaaggaaaccatacagaatttttcgttgaacttgatcacgataacggaccaattaca
ttgcacagctctctcagcaaagtggttaaatatgttcatgccggtttgaagaaactgaaa
caattgtaa
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