Contarinia nasturtii (swede midge): 116338119
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Entry
116338119 CDS
T08003
Name
(RefSeq) ATP-dependent RNA helicase vasa
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cns03036
]
116338119
Enzymes [BR:
cns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116338119
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116338119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Zn_ribbon_RanBP
ResIII
P-loop_SecA
Helicase_C_2
HEM4
SWI2_SNF2
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
116338119
NCBI-ProteinID:
XP_031619052
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MADEWDDEVVPATKPITNVNTAKYKQSQNDGWDDDSSAPAKPTNNNRSQGYSNSKTNDDG
WNDDPKPNNRSNNNGWSGGAKKEDDGWNDEPAQSKSNGWNGGKSSNDDGWGNDNDSSTKK
PFGNRSNNDRGPRKPDWICSECSAKVFGSRSSCFKCNADKGDSKDAPDDGNSRGGRPSDW
ICSECSAKVFGSRSSCFKCNADKGDSKDAPPDDGNSRGGRPSDWICNDCNARVFGNKTSC
FKCNADKGDSKDAPPDDGKSSRGGRAKDWICDNCQAKVYGSKTTCFKCQSDKGDSKDAPE
DGDDSKSGDGGGRSGGRPGDWTCTCGVSNYASRSECFKCNEAKPEGAGGGDAKFNNEANK
EFYIPTEIQEGDLFSAGISSGINFAKYKDIPVKVTDSVRNQAPKPASSFKECGLNDFLLS
NIERSGYTVPTPIQQNAIPIIKAGRDLMACAQTGSGKTAAFLLPMINALMADNAPLNIGR
PYVVIVTPTRELCTQIYNEARKFAQGSIIKCCQIYGGTATRHQNTNINNGCHILVATPGR
LKDFCDKTYITFENLQYFVLDEADRMLDMGFAPAVEEIMRMPSMPATGKRQTLMFSATFP
NDIQRLAGKYLHEYVFLTVGIVGGACQDVEQTIYQVTKFEKRNKLMELLNAEDPKGTMVF
VETKRTADFLASFLSESEHPTTSIHGDRKQSQREEALADFKSGKMKVIIATSVAARGLDI
PKVRHVINYDIPKSIDDYVHRIGRTGRVGNVGKATSFFDAEQDSEIVSDLVKILENAKQT
VPEFLASGGGGGGGGNSSSGFGGTDFRSKSAAPPAHGGGGDDEEW
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaatgggatgatgaagttgttccggcaacaaagccaataaccaatgtaaat
acggcaaagtacaaacagagccaaaatgatggttgggatgacgattcatctgctccagca
aaaccaaccaacaataatcgcagtcaaggctactcaaattcgaagacaaatgacgacggt
tggaacgatgatccaaagccgaacaaccgaagcaacaataacggttggtctggtggtgcc
aagaaagaagatgacggctggaacgatgaaccagcccagagcaaaagcaatggctggaat
ggtggaaagagcagtaacgacgatggatggggtaatgacaacgactcatcgaccaagaaa
ccatttggcaaccgaagtaacaatgatcgtggtccacgcaaacccgattggatttgcagc
gaatgtagtgcaaaggttttcggttcaagaagcagctgcttcaaatgtaatgctgataag
ggagattcaaaagatgcaccagatgatggaaactcgcgaggcggtcggcctagcgactgg
atttgcagcgaatgtagtgcaaaggtgttcggctcaagaagcagctgcttcaaatgtaat
gctgataagggggattcaaaagatgcaccaccagatgatggaaactcgcgaggtggtcgg
cctagtgactggatttgcaatgactgcaatgccagagtctttggtaataaaacatcgtgc
tttaagtgtaacgccgacaaaggtgactcgaaagacgcacctccagatgatggcaaatct
tcccgaggcggtcgcgcgaaggattggatctgcgacaattgccaagcaaaggtgtatggc
tctaaaacaacatgttttaagtgtcaatcagataaaggcgattcaaaggacgccccagaa
gatggcgatgatagcaagtctggagatggtggtggtcgcagcggtggccgtccaggtgat
tggacatgcacttgtggtgtttctaactatgcatcgcgaagcgaatgtttcaagtgcaac
gaagcaaaaccagaaggtgccggcggcggtgatgccaaattcaacaatgaggcaaacaag
gaattttatattccaaccgaaattcaggaaggcgacttgttcagcgctggtatctcgagc
ggaataaatttcgcaaagtataaggacatccctgtcaaggtgacagatagtgtgcgcaat
caggcaccgaagccggcatcgtcgttcaaggaatgtggtttaaatgatttcttgttgagc
aacattgagagatcgggctacaccgtaccaacaccgattcaacaaaatgccattccaatc
atcaaggccggacgtgatttgatggcttgtgctcaaaccggtagcggtaaaactgctgcc
tttttgctaccaatgattaacgcactaatggctgacaatgctccgctgaatattggtcgg
ccatatgttgtcatcgtgacgccaactcgtgaattgtgcacacagatttataatgaagca
cgtaaatttgcccaaggcagcatcatcaagtgttgtcaaatatatggtggaactgcaacc
cgacaccagaacaccaacattaacaacggttgccacattttggttgcaacgccaggacgt
ttgaaggatttttgtgacaagacatacatcacctttgaaaatttgcaatatttcgtactt
gatgaagccgatcgtatgcttgacatgggttttgcaccagccgtcgaagaaattatgcga
atgccatcgatgccagcaactggcaaacgtcagacgctcatgttttcggcaacattcccc
aatgacatccaacgtttggccggaaaatacttgcacgagtatgttttcttgaccgttggt
atcgttggcggtgcatgtcaggacgtcgaacaaaccatttatcaggtgaccaagtttgaa
aaacgtaacaaactaatggaacttttgaatgccgaagatccaaaaggaacaatggttttc
gttgaaaccaagcgtaccgctgactttttggcgtcctttttgtccgaatcggaacatccg
acaacatccattcacggcgatcgaaagcaatcgcagcgtgaagaggctcttgccgatttt
aaatcgggcaagatgaaggtcattatcgctactagcgttgctgcacgtggtttggatatt
ccaaaagtgcgtcatgtcattaactatgacattccaaaaagtattgatgactatgtgcac
cgcattggtcgtactggccgtgtcggaaatgttggcaaagccacatcgttctttgatgcc
gagcaagactcggaaatcgtgtcagacttagttaaaattttggaaaatgccaagcaaaca
gttccagaatttttggcaagtggtggtggcggcggcggtggcggtaactccagctcagga
tttggcggtactgatttccgtagtaaatcagcagctccccccgcacacggaggcggcggc
gatgatgaagaatggtag
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