Contarinia nasturtii (swede midge): 116338123
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Entry
116338123 CDS
T08003
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116338123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cns03400
]
116338123
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
116338123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
116338123
NCBI-ProteinID:
XP_031619056
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MRRSYAPSQLSLNRPLNTSNGLINSESTSKPFKSPLSESPYAKRKCREDKKENRCIAPTI
RPVQSMSEYEALVAKLLSKPFKVPIPDYVPDGNSNRSLGLPRTLIRRALHDPYACNALVL
YTPPDQQTKATEHEKLMQDKTKILVHVVVDPVLGNILRPHQREGVKFMFECVTGVKGDFN
GCIMADEMGLGKTLQCITLLWTLLRQGPDCRPTIVKAIIVCPSSLVKNWYNEFGKWLGNR
VNAFAVENTSKETTIKGLEQFMASQSARTGCPVLIISYETFRNYEKILTGSEVGLLLCDE
GHRLKNCENLTYNALMGLKTKRRVLLSGTPIQNDLTEYYSLIHFVNPGMLGTRTEFKRNY
ENIILRGHDANCTDKEREKAAAKVTELTNIVNQCLIRRTNQILTKYLPVKFEMVICVKLS
KVQTDIYRSFLQSECVRKTVLGKDKSPNALTALANITNLKKLCNHPDLVGDKIADGTDGF
KNAAKYLPEGYNKKELRPDLSGKLMLLDIMLASIKSNTNDKIVLVSNYTQTLDMFERLCR
KRGYGYVRLDGTMTIKKRGKVVTEFNNPDSDRFVFMLSSKAGGCGLNLIGANRLVMFDPD
WNPANDDQAMARVWRDGQTKPCFIYRFLATGTIEEKIFQRQAHKKALSNTIVDNEENGER
HFTKDDLRDLFSLDENCVSDTHAIFKCKRCVDTVQMKLPPPDSDCTSDLANWFHCSNNRG
IPDNILSQAWDVSKCVSFVFHHRSSQAEVKLEDATEKIGQKKKKILRFEDDYDEDEDFEP
EDDERDEDFVL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagacggagttatgcaccgagccaattgtcattgaaccgtccgctaaacacaagcaat
ggtttaataaatagcgaaagtacctcgaaaccattcaaaagtccattgtctgagtcgccg
tatgcaaaacgaaaatgtcgcgaagataaaaaggaaaaccgttgcattgcaccgacaata
agaccagtacagtcgatgagcgaatatgaagcattggtggccaaattattgagtaaaccg
ttcaaagtacccattccagattatgtacctgatggaaatagtaatcgttctcttggtttg
ccccgaactcttattcgacgagcacttcatgatccatatgcttgtaatgctctggtgctt
tacacaccgcccgatcaacaaaccaaagccactgaacatgaaaaattgatgcaagataaa
acgaaaattttggtccatgtcgtggttgatccagtgcttggcaacattttgcgaccacat
caacgtgaaggtgttaaatttatgttcgagtgtgtgaccggtgtaaaaggtgactttaat
ggatgcatcatggctgatgagatgggcttgggtaaaacattgcaatgcataacgctactt
tggacattattgcgacaaggtcctgactgtagaccgactatcgtcaaagcgatcattgtg
tgcccgagttcattggtgaaaaattggtacaatgaattcggaaaatggctgggcaaccgt
gtgaatgcatttgccgttgagaatacgtcgaaagaaacaacaataaaaggtctcgaacag
tttatggcaagtcaaagtgcacgcaccggttgtcccgttttgataataagctatgaaaca
tttcgaaactatgaaaaaattctaaccggatctgaagttggtctattattatgtgatgaa
ggccatcgccttaaaaactgtgaaaatctaacctacaacgctctgatgggtttaaaaaca
aaacgaagagtcttattatctggtacacccatacaaaatgatcttaccgaatactacagc
ttgatccattttgttaatccgggaatgcttggaacgagaactgaatttaaacgcaattat
gagaacattatattacgaggtcacgatgcaaactgtaccgacaaagaacgcgaaaaggcg
gccgcaaaagtgaccgaactcacaaatattgtgaaccagtgtctgatacgtcgtacgaat
caaattctcacgaaatacttgccggtcaaattcgaaatggtgatttgtgttaaattgagc
aaagtacaaaccgatatttatagaagtttcttacaatcggagtgtgttcgaaaaactgtt
ttgggcaaagataaaagtccaaacgctctgacagcgctcgcaaatatcacaaatctgaaa
aaactgtgcaatcatccagatttagtcggtgataaaattgccgatggaaccgatggattc
aaaaatgctgccaagtatttgcccgaaggatacaacaaaaaagaacttcggccagattta
agcgggaaattaatgcttcttgacattatgctcgccagcataaaatcaaacacaaacgat
aagatcgttttggtttcaaattacactcaaacactggatatgtttgaacgcctctgtcgc
aagcgtggttatggctatgtacgactagacggcacaatgacaattaaaaaacgcggcaaa
gtcgtcaccgaatttaataatccagactcagatcgattcgttttcatgctcagctcaaaa
gctggtggctgcggtttaaatttaatcggcgcaaatcgattggtcatgtttgatccagat
tggaatccggccaacgatgatcaagcaatggcacgagtgtggcgagatggtcaaacgaaa
ccatgcttcatttatcgatttcttgcgacgggaaccattgaagagaagatttttcaacgc
caggcccacaagaaggcattatcaaacacaattgttgacaacgaagaaaatggtgaacgt
cactttacaaaagatgatctacgtgatctgttcagtttggatgaaaattgtgtatcggat
actcatgcaatattcaagtgtaaacggtgtgtggatactgttcagatgaaattaccgccc
cctgattcggactgcacatcagatttggccaattggtttcactgttcaaataacaggggc
ataccagataatatactcagccaagcttgggatgtgtcaaagtgtgtgtcattcgtgttt
catcatagatccagtcaagccgaagtgaagctcgaagatgccactgaaaaaattggtcaa
aagaagaagaaaatcttacgctttgaagacgactacgatgaagatgaggattttgagccc
gaagacgatgaaagagacgaagactttgttttgtag
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