Contarinia nasturtii (swede midge): 116338180
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Entry
116338180 CDS
T08003
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116338180
Membrane trafficking [BR:
cns04131
]
Protein recycling
Others
EARP complex
116338180
Endosome - Golgi transport
Tethering complex
GARP complex
116338180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF6507
Motif
Other DBs
NCBI-GeneID:
116338180
NCBI-ProteinID:
XP_031619144
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MATIDEKQVKSRDTLISQQLEDKEIQEILKSGTDLRQYSQQIEKDLKAVENQSIEEYIKE
SQNIACLHNQIGDCDSILERMESMLTNFQSILSNISTEITTLQKKSVSMSVQLTNRQSVR
AQLSQFIEDMAIPEDMISVIMQTAVTEKDFSTQLSNLNHKLNLVKELQFKDAKSSEDVKD
VLEKLKIKAMSKIRQYLLEQIYKFRKPMTNYQIPQNAMLKNKFFFEFILCNERQVGQEIC
NEYVDTMSKIYYSYFKSYSSRLASLKFEDPVTKDNLMGHEDTNTKQSLFSKATSLRNKGT
TFTIGNRGEILSQQLEAPILVPHAQQKIQYPYEALFRSEQYALVDNACREYLFGTEFFMV
RGSQAQDLFNQIMGKTLTLLIKNVETYIQDCYDSIAMFLCIQLILRFQILCHKRCVPALD
KYWDSLQAAIWPRFELIFRMNIQSVRDCDPNKFNKSLAPHYITRRYAEFSAAIVGISEQF
PNELVSRLLLDLQNEVECFIMKMAGIFTSRKEQLIFLINNYDMILNVLLEHTRDNSKEAE
TFRHHLTTRSTEYVEEILAPHFGGIMMFVKDMEHQIEKNPSGNVTYNEHHALQLVTKFSA
NWKKAIEDINREITVSFQSYVTGSTLLQLALASLVQYYHRFHKLLNPNERMQLTNIHLIT
VEIKKINKLSGFTN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatcgatgaaaaacaagtgaaatcgagagatactctcataagtcagcaattg
gaagataaggaaattcaagagattttgaaaagtggcaccgatttacgccaatattcacaa
caaattgaaaaagatctgaaggctgtcgaaaatcaatcgattgaagaatacattaaagaa
agccaaaatattgcatgcctacacaatcaaattggtgattgcgattcgattttggagcga
atggaatcgatgcttaccaattttcagagcattttgagtaacataagtacggagataaca
acattgcagaaaaaatcggtatcgatgtctgtacaattgacaaatcgtcagagtgtgcga
gcgcaactatcacagttcattgaggatatggccattccagaagatatgattagtgtcata
atgcaaacggctgttaccgaaaaagatttcagtacacagttaagtaatctcaatcacaaa
ttgaatcttgtcaaagagctacagttcaaagatgccaagtcatcggaggatgttaaagat
gttttggaaaagctaaaaatcaaagcaatgtcgaaaatacgtcaatatttgctagaacag
atttataaattccgtaaaccaatgaccaactaccaaattccacagaatgcaatgctgaag
aacaaattcttttttgagtttattctatgcaatgaacgacaagttggtcaggagatttgc
aacgaatatgtagatacaatgagcaaaatttattacagctattttaagagttattcatca
cgtttggcatcattgaagtttgaagacccagtgacaaaagacaatttaatgggacatgaa
gacactaacaccaaacagagtctattctccaaagcgacttcattgcgcaacaaaggcaca
acattcacaattggtaatcgtggtgaaattttaagccagcagcttgaagcaccgatctta
gttccacatgcacaacagaaaattcaatatccgtacgaagctctgtttcgttccgagcag
tacgcattggttgataatgcatgcagagaatatctatttggcactgaatttttcatggta
cgcggcagtcaggcacaagatttattcaatcaaattatgggcaaaacattgacattgtta
attaaaaatgtcgaaacttacattcaagattgttatgatagcatcgcaatgtttctgtgc
attcagttgattttacggtttcaaattttatgccataaacgatgcgttccggccttggat
aagtactgggactcattgcaagctgcgatttggccgcgatttgagctgatctttcgaatg
aacattcagagtgtgcgtgattgtgatccgaataaattcaacaaaagtcttgccccgcac
tatataacgcgtcgctatgctgaattcagtgcggctatcgttggaatatcagaacaattc
ccaaatgagctcgtaagccgtcttttgcttgatcttcagaatgaagttgaatgtttcatc
atgaaaatggctggcatttttacgtcaagaaaggagcaattgatatttttgatcaataac
tatgatatgattttgaatgtattgctagaacatacacgtgataattcgaaagaggcagag
acattccgccatcaccttacgacacgaagtacagaatatgttgaagaaatattggcgccg
cactttggtggaattatgatgtttgtgaaagatatggagcatcaaattgagaaaaatccg
tccggcaatgtaacttataatgaacatcatgcattacaattggtaaccaaattttcggcc
aattggaagaaagcgatcgaagatataaatcgtgaaatcacagtatcatttcagtcgtat
gtcaccggttccacgttgctacagttagcattggccagtttagtgcaatattatcatcga
tttcataagcttctcaatccaaatgaacgtatgcaattaactaatattcatctcatcaca
gtggaaattaagaaaattaacaaactatccggattcacaaactaa
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