Contarinia nasturtii (swede midge): 116338436
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Entry
116338436 CDS
T08003
Name
(RefSeq) double-strand-break repair protein rad21 homolog
KO
K06670
cohesin complex subunit SCC1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cns03036
]
116338436
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116338436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
FabD_helical_ins
Motif
Other DBs
NCBI-GeneID:
116338436
NCBI-ProteinID:
XP_031619542
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MFYAHIVLAKKGPLARIWLAAHWDKKLTKAHVFETNIEQSVDGIMQPKVKLALRTSGHLL
LGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGMVDLPEEHREAAVNAITLPEVFHDFDTA
LPELNEVDIEAQFSINQSRADEITMREDYGALPMTIHDDGFGDIGFDADGPDFIRDDVDT
TIDEHLISEELDLDERTLKEPIAGTSRSMQELDSSQMITDDGFGGSGFGQEPAAGLFEGD
LFADAPLPQSTMQQIEHDSEDDLDAGWDMGAHSTASSSVGSRPPTPMQAGPSQMMDIRAP
SVTSPTQQQLDDIPHIGEGPEISADDGLPSAAADAVESAHDQEDEHELHDEESFALAPID
ASALKGITKTKRKRKLIVDEVKNISGEEMKSQLANTSDIITTLDLAPPTKRLMYWKETGG
VEKLFALPSRDIPARELSKNYQRNLTSRSTGVEDFSMLGPADALALDQYQEQPQVILQQP
EPAVPGKRGRKRKVQETQAQVPEVRAAELQEESLDVLPPPQTPQMPSPVRESVSHLDGDI
PLAYTSNNLSVPSGMTPLHGGMTPVSLHGDYAAAFTPLDHGMMTPQHPSLDQIESIPNLP
VDQVSSILNGTEMEGFANMGYDDSHQIGGPGMSERIASDWNDDYDFPPSVVAPQPGDEQM
ENETDEQFEERVLNKRAAQMFVSVRARLQKQDSIQLSEMTYRNNRKQAAQKFYSLLVLKK
FQALEIRQDVAYGDIAVTKGIMFDNPKL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttctacgcacatattgtattggccaaaaaagggccattggcccgaatttggttggcc
gctcattgggataaaaaattgaccaaagcgcacgtttttgaaacgaacattgaacagagt
gtcgatggtataatgcagccaaaagtgaaattggcattgcgtacatcgggtcatttgttg
cttggagtcgttcgcatctattcaagaaaagccaaatatttacttgccgattgtaatgaa
gcttttgtcaaaattaaaatggcatttcgaccgggaatggtcgatttgccggaagaacat
cgcgaagcggccgttaatgcaattacacttccagaagtttttcacgattttgatacggcg
ctgcctgaattaaatgaagtagatatagaagcacagttttctataaatcaatcaagagcc
gatgagattacaatgcgcgaagactacggtgccctgccgatgacaattcatgatgatggc
ttcggtgatattggctttgatgccgatggtccagatttcattcgtgatgatgtcgataca
accattgatgaacatttgatcagtgaagaattggacctcgacgaacgcacattaaaagaa
ccaattgctggaacatcacgttcaatgcaagaattggattcgtcgcaaatgatcaccgat
gatggtttcggtggaagcggttttggtcaagaaccagcggccggtttattcgaaggtgat
ttattcgccgatgcaccattaccacagtcaacgatgcaacaaatcgaacatgattccgag
gatgatttggatgccggttgggatatgggcgcacattcaacggcgtcaagctcggtcggt
tcaagaccgccaacaccaatgcaagcgggaccatcacaaatgatggacattcgagcgcca
tcggtaacatcaccaacacaacagcagctcgatgatataccgcatatcggtgaaggtcca
gagatatctgctgacgatggtttaccaagtgcggctgccgatgctgtcgaaagtgcacac
gatcaagaagatgagcatgaactacatgacgaagaaagttttgcactggcaccgatcgat
gcatcagcgctgaaaggaatcacaaaaaccaaacgaaaacgtaaacttattgtggacgaa
gtgaaaaacatctccggcgaagagatgaaaagtcaattggcaaacacatcggacattata
acgacattagatttggcgccgccaacaaaacgacttatgtactggaaagaaacgggtggc
gttgaaaaattgttcgccttaccatccagagatattccagccagagaattgtcaaagaac
tatcaacggaatttaacatcacgatcgacgggcgttgaagatttttcaatgcttggtccg
gccgatgcattggcattagatcaatatcaagaacaaccgcaagtaattttacaacaacca
gagccagctgttccgggtaaacgtggccgaaagcgcaaggtccaagagactcaagcacaa
gtgccagaagtacgggcagctgaattacaagaagaatcattagacgtactaccaccgcca
caaacacctcaaatgccaagtccagttcgtgaaagtgtatcacatttggatggcgatatt
ccgctcgcatacacatcaaacaatctgtctgtaccatctggaatgacgccgcttcatggt
ggtatgacaccagttagtttgcatggtgattatgcggccgcatttacaccattagatcat
ggtatgatgacaccacaacatccgagcctcgatcaaattgaatcgataccaaatttgccg
gtcgatcaagtgtcatccatcttgaatggaactgaaatggaaggattcgccaatatgggt
tatgacgatagtcatcaaattggtggaccaggcatgtcagaacgcatcgctagcgattgg
aatgatgattacgatttcccgccatcagttgttgcacctcaaccgggcgatgaacaaatg
gaaaacgaaaccgacgaacaattcgaagaacgtgtgctaaataagcgggcagctcaaatg
tttgtttcagttcgggcacgtttacaaaagcaagacagcatacaattgtcagaaatgaca
tacagaaacaatcgaaaacaggcggcacaaaaattctattcgttattggtgttaaagaaa
ttccaagcgctagaaataagacaagacgtggcatatggtgatattgctgtaacaaaagga
attatgtttgataatccaaaactctaa
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