Contarinia nasturtii (swede midge): 116338461
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Entry
116338461 CDS
T08003
Name
(RefSeq) WD repeat-containing protein 44 isoform X1
KO
K20241
WD repeat-containing protein 44
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116338461
Membrane trafficking [BR:
cns04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116338461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_1st
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
116338461
NCBI-ProteinID:
XP_031619588
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MQASIDSDDSEEYYDAEDSTPNRLMKKRSPNSEDDGFVYPDTNVEKPSDKCDLDSLTRQK
QQGQKATTSSVPNTQPHVFAEPKPSGRQRFRDLRQCMQNDEDENPGNTLTPDSQNSSVEG
VFAPQRSTHPFRIIENSDTISIQSMTSLGRVGRILAGTVDVINSNTEKDTCSTNASSIVD
WNAASTSNTASTTMVTDVFNDHRKLKSTANNSSSSSSSNMNNSSTSSNDNTNINTTLQEP
DVIASTKLAHSKTTDSLTSSGPIAPPRRKKKPVKTISTNSVEQMSSCTESSPSSTESKLK
LSVALPPASSECAVSLPSPATKAIETLTREIENSFVISSDCNSREMCGSMSRICQSLGNS
STSVYSKPSPSNSSKSNSAPGRASSIDPNQGLNLYKATRGQYVVKPQDEEANKAEGPSKE
ELERIEKIRAEIFGTNSTAQRPHLSATGSNSLGNGMRYGNNLAKAAQLAKERRKSAGDED
VLKQLNVFVRTRTDSGKKLTDFEILEQVPVKNLDTGEKIPLSEVKPPPPPDGWNPLSLHI
HKLTSHLEALQKESDEESVIGVPPGAETPAMDEDEVENEESGRIKRKTARLKRFFGSTMR
KTVDRAKLIASEVSHARHKEDVADIVDVVNPEQNIKIKASSTNKGPYEFAKLQHVQDLSG
EHTGAVWCMKFSSCGRLLATAGQDRVLRIWVLKDAYPYFQDMRTKYNADQKSSPTPSQES
LVSHNSAEEAVAMATAAEQSAGPFMPKAFCSYTGHTSDLLDVSWSKNYFILSSSMDKTVR
LWHISRRECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVTLWNELDGQ
TKLITAANFCQNGKFAVVGSYDGRCLFYDTDQNLKYHTQIHVRSTRGRNKTGRKISGIEP
MPGEDKILVTSNDSRVRLYDLRDLNLSCKYKGYLNTSSQIKASFSHDGKYIIAGSENQCI
YVWKTNHDYKLSSVRRDRSDFWEGIKAHNATVTCAIFTPHPEAIIKPEIDDDDISSVNSS
NIAQDPMVEQRKKGCGYVLISADFNGAIKVFVNKTKPKHSSLPYTAILD
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttccattgattcagatgattcggaggagtattatgatgctgaagattcaacc
ccgaatcgattgatgaaaaaacgttctccgaattctgaagatgacggttttgtatatccc
gatacaaatgtagagaagccatccgataaatgtgatttggattcattgacaaggcaaaag
cagcagggtcaaaaagcaacgacatcatcggtacccaatacacaacctcatgtgttcgct
gaaccaaaaccatccggtaggcagcgctttcgtgatttgcgtcaatgcatgcaaaacgat
gaggatgaaaatcctggcaacacactgacgcctgattcacagaatagttcagtggaggga
gtttttgcgccacaacgatcaacccatccctttcgaataatcgaaaacagcgataccatt
agtatacaaagtatgacatcattgggtcgagttggacgaattttagctggaacagttgat
gtaattaattcaaatacggaaaaagatacctgcagcacaaatgcatcatcgattgttgat
tggaatgcggcgagtacaagtaatacggcatcaacaacaatggtaactgatgtattcaat
gatcatcgtaaattaaaatcaacagctaataatagtagcagtagtagcagtagcaatatg
aataattcaagtaccagcagcaatgataataccaacattaatacgacattacaagagccc
gatgtgattgccagcaccaaattagcacattcaaaaacaaccgatagccttacgtcaagt
ggaccgattgcaccgccacgaaggaagaaaaaaccagtgaaaacaatatcaacaaattcg
gtggaacaaatgagtagttgtaccgaatcgtcaccgtcatccacagaaagtaagcttaaa
ttaagtgttgccttaccgccagcatcgagtgaatgtgccgtatcattgcccagtccagca
acaaaagccattgaaacattaaccagagaaattgaaaattcatttgtcatttcatcggat
tgtaattcacgtgaaatgtgtggttcaatgagtcgaatatgtcaatcgttgggcaattca
tcgacatctgtctattcaaaacctagtccatcaaatagttcgaaaagtaattcggcaccg
ggtcgagctagttcgattgatccaaatcaaggtttaaatttgtacaaagcaacacgcgga
caatatgttgtgaaaccgcaagacgaagaagcaaataaagccgaaggtccatctaaagaa
gaactcgaacgcatcgaaaagattcgtgccgaaatctttggcacaaattcaaccgcacaa
cgtccacatttatcggccaccggttcaaatagcctgggcaatggaatgcgatacggtaat
aatttagcgaaagcagcacaattggcaaaagaacgacgaaaatcggccggtgatgaagat
gtattgaaacaattaaatgtttttgtacgaacgcgtaccgattcagggaaaaagcttacg
gattttgaaattttagaacaagtgccagttaagaatttagatacaggtgaaaaaattcca
ttatctgaagtgaaaccacctccaccacctgatggatggaatccattatcacttcacatc
cataaattgaccagtcatttggaggcattgcaaaaagaatcggacgaagagagtgtgatt
ggtgtgccgcctggtgctgaaacgccagcaatggacgaagacgaagttgaaaacgaagaa
agtggtcggataaagcggaaaacagctagactgaaacgtttcttcggttcaactatgcga
aaaactgtcgatagagcgaaattaattgcatcggaagtgtcacatgcacgtcacaaagag
gatgttgccgatattgttgatgtggtcaatcccgaacaaaatattaaaattaaagcgtct
agtacgaataaaggaccgtatgaatttgcaaaattgcaacacgttcaggatttgtcgggc
gaacataccggagctgtgtggtgcatgaaattcagctcatgcggtcgtttacttgcaaca
gccggtcaagatcgtgtacttcgtatttgggtgttgaaagatgcttatccatattttcaa
gatatgcgaacaaaatacaatgctgatcaaaaatcatcgccaacaccatcacaagagtcg
cttgtatcacataattcagccgaagaggccgttgcaatggcaacagctgccgaacaaagt
gccggaccatttatgccaaaggcattttgttcgtacaccggacacacttcagatctcctt
gatgtgtcatggtcaaagaattattttattttatcgagttcaatggacaaaactgtacga
ctttggcatatttcacgacgtgaatgtctttgttgttttcaacatattgattttgttacc
gctattgcatttcatccccgtgacgatcgttactttttaagtggcagtctcgatggtaaa
ctacgtctatggaatatacccgataaaaaggttacgctatggaatgaattggatggccaa
acaaaattaataacggcagcgaatttctgtcaaaatggaaaatttgccgtcgttggttcg
tatgatggccgttgtttgttttatgataccgatcaaaatctaaaataccatacacaaatt
catgtgcgctcgacacgaggacgaaacaaaactggacgaaaaatcagtggcattgaacca
atgcccggcgaggataagattttagtaacatcgaacgatagtcgggtgcgtttatatgat
ttacgtgatttgaatttaagctgtaaatacaagggctacttgaatacgtcatcacaaata
aaagcatcgtttagtcatgatggcaaatacatcattgccggttcggaaaatcaatgtatc
tacgtatggaaaaccaatcacgattataaattaagttcggtgcgacgtgaccgaagtgat
ttctgggaaggtattaaagcacacaatgcaacggttacatgtgcaatatttacaccacat
cccgaggcaataattaaaccagaaatcgacgacgatgatatatctagtgtaaatagctca
aacatagcgcaggatccaatggttgagcagcgtaaaaaaggttgtggttatgtattgatt
agtgccgatttcaatggagccatcaaagtgtttgtgaataaaacaaaaccgaaacatagc
agtttgccatacacggcaattttagactaa
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