Contarinia nasturtii (swede midge): 116338477
Help
Entry
116338477 CDS
T08003
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116338477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116338477
03110 Chaperones and folding catalysts [BR:
cns03110
]
116338477
04121 Ubiquitin system [BR:
cns04121
]
116338477
Enzymes [BR:
cns01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
116338477
Spliceosome [BR:
cns03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
116338477
Complex C
U4/U6.U5 tri-SnRNP related factors
116338477
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
116338477
Chaperones and folding catalysts [BR:
cns03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
116338477
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
U-box type E3
116338477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
zf-Nse
Motif
Other DBs
NCBI-GeneID:
116338477
NCBI-ProteinID:
XP_031619618
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MGKRQHQKDKMYLTYTEWSQFYGGKKLESNEDEHIKFKRLPFDCCSITMIPFETPYSDLD
GNIFELNAIIDFLKTFKVNPITGKPCDSKSLIKLNFHRNADGDYHCPSLFKPFTKNSYIV
AIASTGNVFSYEAVEQLNIKTKNWKDLVDDTPFVRKDIITIQDPNKLEKFNISTFYHIRK
GLRVETEEEKLEKKDPHGRLKTVSAETKDILNELEAGFKSNEKKDETEASSSRKVIADKF
NSAHYSTGAVAASFTSTAMAPVYNHEAAILDDCIVRYERVKKKGYVRLNTNLGPLNIELY
CDMVPKTCENFMRHCSNGYYDGTVFHRSIKNFMIQGGDPTKSGRGGKSIWGDKFEDEILP
QLSHTGRGILSMANSGPNTNGSQFFITYRSCRHLDGKHTIFGKLVGGMDTLNEMEKVEVD
NKDRPIEDIVIEKIHIFVDPYQEADEMLAKERADEVEKQQKAAAEEKKRKEKAQPLKVFR
SGVGKYLNTASISTSSQPTTTSTDAPLPKKKKTQTFGFGNFGSW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacgacaacatcaaaaggataaaatgtacctaacgtacactgaatggtctcag
ttttatggtggcaaaaaattggaatcaaacgaagacgaacatattaaatttaagcgatta
ccattcgattgctgttcgataacaatgattccattcgaaacaccatacagtgatttggat
gggaacatctttgaattgaacgcaataatcgactttttgaaaacgtttaaagttaatcca
attactggaaagccttgcgattccaaatcattgattaaattgaattttcatcgcaatgct
gatggtgactatcactgtccatcattgtttaaaccgttcaccaaaaattcgtacatcgtt
gccattgcatcaactggcaatgttttctcatatgaagcggttgaacaattaaatatcaaa
acaaagaattggaaagatttagtggacgatacgccgtttgtgcgaaaggatataattaca
attcaagacccaaacaaattagaaaagtttaatatatcgacgttttatcatattcggaaa
ggcttacgtgttgaaactgaggaagaaaaattggaaaagaaagacccacacggtcgccta
aaaaccgtatcggctgaaacaaaagacatcttgaacgagttagaggcgggtttcaaaagc
aacgagaaaaaagatgaaacagaggcttcaagcagccgtaaagttattgccgacaaattt
aattccgcacattattcaaccggtgcggttgcggcaagttttacgtcaacagcaatggca
ccagtttataatcacgaagcggccatattggacgattgcattgttcgatacgaacgagtc
aagaagaagggatatgttagactgaatacaaatcttggacctctcaatatcgaactgtat
tgtgatatggtgccaaaaacgtgtgaaaattttatgcgacactgttcaaatggttattat
gatggtacggtatttcatcggtcgattaaaaattttatgattcaaggcggtgatccaaca
aaaagtggccgtggtggaaagtccatctggggagataaatttgaagatgaaattttacca
caattgtcacacaccggtcgaggtatattatcaatggcaaattccggaccaaatacaaac
ggttcacaatttttcattacgtatcgatcgtgccgtcatttggatggaaaacatacgatt
tttggaaaattggttggtggaatggacacgctaaatgaaatggaaaaggtcgaagtggac
aacaaagatcgacctatcgaagatattgtcattgagaagatacacatatttgtggatcca
taccaagaagctgacgagatgctggcaaaagaacgtgctgacgaagtggaaaagcaacaa
aaagcagctgccgaagaaaaaaagcgaaaagaaaaagcacaaccattgaaagtatttcgt
tcgggcgttggtaaatatttaaacaccgcatcaatatcaacatcaagtcaaccaacgacg
acaagcactgatgctccattgccaaagaaaaagaaaactcaaacttttggttttggtaat
ttcggttcatggtga
DBGET
integrated database retrieval system
