Contarinia nasturtii (swede midge): 116338558
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Entry
116338558 CDS
T08003
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03018
RNA degradation
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116338558
09123 Folding, sorting and degradation
03018 RNA degradation
116338558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116338558
03041 Spliceosome [BR:
cns03041
]
116338558
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116338558
mRNA degradation factors
5'-3' decay
Lsm complex
116338558
Spliceosome [BR:
cns03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
116338558
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
116338558
NCBI-ProteinID:
XP_031619768
LinkDB
All DBs
Position
Unknown
AA seq
79 aa
AA seq
DB search
MSRKEALSQFINQIHGRPVVVKLNSGVDYRGVLACLDGYMNIALDQTEEYANGQLKNKYG
DAFIRGNNVLYISTQKRRV
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtaaagaagcattgtcgcagttcatcaatcaaatccatggtcgtcctgtagtg
gtcaaattgaacagcggtgtcgattaccgaggtgttttggcatgtcttgatggttacatg
aacattgcattggatcaaacggaagaatacgcaaatggtcaattgaaaaacaaatacggc
gatgcattcatccggggaaacaatgtattgtatatttcaacgcagaagagacgagtgtaa
DBGET
integrated database retrieval system
